Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.4e-84 315.5 157 100.0
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 9.6e-78 293.5 157 94.3
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 6.0e-72 274.2 145 95.9
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 6.0e-72 274.2 145 95.9
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 5.6e-70 267.7 145 94.5
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 2.1e-64 249.2 145 83.4
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 6.7e-63 244.2 145 82.1
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 4.3e-62 241.5 145 79.3
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.3e-61 240.0 145 83.4
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 2.1e-61 239.2 145 79.3
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 4.8e-61 238.0 145 78.6
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 8.2e-61 237.3 146 82.2
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 1.8e-60 236.1 145 80.0
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 2.4e-60 235.7 146 82.2
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 5.3e-60 234.6 145 77.9
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 9.0e-60 233.8 149 76.5
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 1.2e-59 233.4 145 78.6
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 7.6e-59 230.7 146 80.8
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 1.0e-58 230.3 146 77.4
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.0e-58 230.3 145 75.9
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 1.0e-58 230.3 145 74.5
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 1.0e-58 230.3 145 74.5
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.3e-58 229.9 145 78.6
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 2.2e-58 229.2 145 75.9
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 2.2e-58 229.2 145 75.2
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.2e-58 229.2 146 76.0
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 2.2e-58 229.2 145 75.9
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 2.9e-58 228.8 146 79.5
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 2.9e-58 228.8 146 80.1
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 3.8e-58 228.4 145 77.9
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 3.8e-58 228.4 146 77.4
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 3.8e-58 228.4 146 78.8
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 5.0e-58 228.0 145 75.2
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 6.5e-58 227.6 150 72.0
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 6.5e-58 227.6 145 75.2
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 8.5e-58 227.3 146 78.8
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 1.9e-57 226.1 146 76.7
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 2.5e-57 225.7 146 76.7
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.5e-57 225.7 146 76.7
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.5e-57 225.7 145 73.8
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 3.2e-57 225.3 145 75.2
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 3.2e-57 225.3 146 74.7
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 4.2e-57 224.9 145 72.4
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 5.5e-57 224.6 146 74.7
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 5.5e-57 224.6 146 73.3
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 7.2e-57 224.2 146 76.7
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 7.2e-57 224.2 146 77.4
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 9.3e-57 223.8 146 75.3
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 9.3e-57 223.8 146 76.7
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.2e-56 223.4 146 76.0
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 1.2e-56 223.4 146 75.3
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.6e-56 223.0 145 75.2
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 2.1e-56 222.6 147 76.2
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 6.1e-56 221.1 146 75.3
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 6.1e-56 221.1 146 75.3
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 6.1e-56 221.1 146 75.3
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 7.9e-56 220.7 146 75.3
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 1.3e-55 219.9 146 74.7
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 1.8e-55 219.5 146 75.3
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 2.3e-55 219.2 145 73.8
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 2.3e-55 219.2 146 74.0
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 3.0e-55 218.8 146 74.0
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 3.0e-55 218.8 145 71.7
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 3.0e-55 218.8 146 74.0
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 5.1e-55 218.0 146 74.7
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 5.1e-55 218.0 145 72.4
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 6.7e-55 217.6 146 74.0
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 6.7e-55 217.6 145 74.5
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 8.7e-55 217.2 145 73.1
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 8.7e-55 217.2 146 76.0
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.5e-54 216.5 146 74.7
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 2.5e-54 215.7 146 72.6
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 2.5e-54 215.7 146 73.3
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 3.3e-54 215.3 146 73.3
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 3.3e-54 215.3 146 71.9
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 4.3e-54 214.9 146 76.0
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 5.7e-54 214.5 146 73.3
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 5.7e-54 214.5 146 72.6
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 5.7e-54 214.5 145 71.7
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 7.4e-54 214.2 146 72.6
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 7.4e-54 214.2 139 75.5
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 9.7e-54 213.8 146 71.9
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 9.7e-54 213.8 146 73.3
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 9.7e-54 213.8 146 73.3
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 9.7e-54 213.8 146 72.6
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 9.7e-54 213.8 146 73.3
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 1.3e-53 213.4 146 74.7
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.3e-53 213.4 146 71.9
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 2.8e-53 212.2 146 74.7
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 2.8e-53 212.2 145 69.7
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.8e-53 212.2 144 75.7
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 6.3e-53 211.1 146 74.7
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.1e-52 210.3 146 71.2
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 1.1e-52 210.3 145 69.0
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 1.8e-52 209.5 145 69.7
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 4.1e-52 208.4 146 70.5
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 2.2e-50 202.6 146 71.2
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 3.2e-49 198.7 163 65.0
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 7.2e-49 197.6 146 66.4
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 2.7e-48 195.7 137 66.4
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 7.9e-48 194.1 146 67.1
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 8.8e-47 190.7 117 76.1
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 3.7e-45 185.3 146 69.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 9.1e-44 180.6 126 71.4
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 1.5e-43 179.9 138 63.8
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 2.0e-38 162.9 138 61.6
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 8.2e-37 157.5 146 61.6
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 2.2e-34 149.4 114 69.3
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 3.8e-34 148.7 140 53.6
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 5.0e-34 148.3 159 53.5
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 2.5e-33 146.0 146 54.1
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 1.2e-32 143.7 139 52.5
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 5.7e-30 134.8 87 75.9
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 7.5e-30 134.4 133 52.6
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.1e-28 130.6 81 82.7
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.8e-28 129.8 137 50.4
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 1.7e-26 123.2 145 49.7
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 7.2e-25 117.9 138 44.2
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 3.4e-22 109.0 155 41.3
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 2.4e-20 102.8 138 41.3
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.0e-18 97.4 66 69.7


User provided reference genes

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