Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 5.0e-86 321.2 183 100.0
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 3.5e-39 165.6 148 58.1
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 2.4e-35 152.9 142 57.7
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 4.9e-33 145.2 128 57.0
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 6.2e-28 128.3 134 56.0
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 4.9e-25 118.6 136 50.0
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 1.9e-24 116.7 101 62.4
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 5.5e-24 115.2 126 53.2
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.3e-22 110.5 126 50.8
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 3.0e-22 109.4 124 50.8
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 3.0e-22 109.4 92 60.9
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 3.9e-22 109.0 126 50.8
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 6.7e-22 108.2 126 50.8
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 1.5e-21 107.1 106 54.7
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 1.9e-21 106.7 126 50.0
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.9e-21 106.7 126 50.0
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 3.3e-21 105.9 110 54.5
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 9.6e-21 104.4 137 47.4
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 2.8e-20 102.8 116 51.7
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 3.7e-20 102.4 101 56.4
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 3.7e-20 102.4 120 51.7
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 6.2e-20 101.7 87 62.1
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 3.1e-19 99.4 97 54.6
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 3.1e-19 99.4 124 48.4
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 3.1e-19 99.4 111 50.5
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 4.0e-19 99.0 116 50.9
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 4.0e-19 99.0 137 45.3
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 4.0e-19 99.0 121 50.4
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 1.5e-18 97.1 139 43.2
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 2.6e-18 96.3 89 59.6
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 3.4e-18 95.9 122 50.0
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 4.5e-18 95.5 111 52.3
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 2.9e-17 92.8 98 57.1
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 6.5e-17 91.7 133 45.9
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 6.5e-17 91.7 139 44.6
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 8.4e-17 91.3 111 52.3
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 1.4e-16 90.5 121 51.2
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 2.5e-16 89.7 141 47.5
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 3.2e-16 89.4 62 66.1
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 4.2e-16 89.0 114 47.4
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 7.1e-16 88.2 115 48.7
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 9.3e-16 87.8 108 51.9
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 2.1e-15 86.7 148 40.5
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.0e-14 84.3 65 64.6
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.0e-14 84.3 56 69.6
Cpa.g.sc20.116 Carica papaya HOM05D007970 ORTHO05D009943 1.8e-14 83.6 114 48.2
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 2.3e-14 83.2 91 56.0
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 1.5e-13 80.5 139 42.4
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 1.9e-13 80.1 122 36.9
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 3.3e-13 79.3 102 45.1
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 5.7e-13 78.6 153 35.3
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.4e-13 78.2 129 40.3
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 1.3e-12 77.4 129 41.9
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.6e-12 77.0 129 41.9
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 3.7e-12 75.9 116 41.4
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 3.7e-12 75.9 83 53.0
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 4.8e-12 75.5 95 43.2
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.1e-11 74.3 116 40.5
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 4.1e-11 72.4 91 46.2
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 9.0e-11 71.2 107 43.9
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 9.0e-11 71.2 107 43.9
Atru.chr5.3444 Acer truncatum HOM05D007970 ORTHO05D009943 1.5e-10 70.5 111 40.5
ClCG02G012110 Citrullus lanatus HOM05D007970 ORTHO05D009943 2.6e-10 69.7 94 46.8
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 2.6e-10 69.7 80 52.5
TAR268G0003 Trochodendron aralioides HOM05D006872 ORTHO05D006261 5.9e-10 68.6 99 42.4
Nn2g14262 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.7e-09 67.0 95 37.9
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 2.2e-09 66.6 133 39.8
Nn6g34756 Nelumbo nucifera HOM05D006872 ORTHO05D006261 1.1e-08 64.3 99 38.4
TAR633G1261 Trochodendron aralioides HOM05D006872 ORTHO05D006261 1.1e-08 64.3 99 39.4
TWI77G0288 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 2.5e-08 63.2 63 54.0
Peaxi162Scf00373g00094 Petunia axillaris HOM05D007970 ORTHO05D009943 9.4e-08 61.2 57 57.9
Aqoxy4G02683 Aquilegia oxysepala HOM05D006872 ORTHO05D006261 1.6e-07 60.5 99 39.4
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 1.6e-07 60.5 85 43.5
TWI53G1355 Tripterygium wilfordii HOM05D006872 ORTHO05D006261 1.6e-07 60.5 90 43.3
MELO3C034691.2 Cucumis melo HOM05D007970 ORTHO05D009943 2.7e-07 59.7 95 46.3
CiPaw.10G015400 Carya illinoinensis HOM05D006872 ORTHO05D006261 7.9e-07 58.2 82 42.7
CsaV3_3G037750 Cucumis sativus L. HOM05D006872 ORTHO05D006261 7.9e-07 58.2 67 50.7
Lsat_1_v5_gn_2_55301 Lactuca sativa HOM05D006872 ORTHO05D006261 7.9e-07 58.2 68 44.1
MD12G1037000 Malus domestica HOM05D006872 ORTHO05D006261 7.9e-07 58.2 77 44.2
Nitab4.5_0011425g0030 Nicotiana tabacum HOM05D006872 ORTHO05D006261 7.9e-07 58.2 75 42.7
Actinidia07935 Actinidia chinensis HOM05D006872 ORTHO05D006261 1.0e-06 57.8 62 53.2
ECA238G4730 Erigeron canadensis HOM05D006872 ORTHO05D006261 1.0e-06 57.8 68 47.1
CDE02G4309 Ceratophyllum demersum HOM05D006872 ORTHO05D006261 1.4e-06 57.4 84 40.5
Nitab4.5_0000020g0340 Nicotiana tabacum HOM05D006872 ORTHO05D006261 1.4e-06 57.4 72 45.8
Sc18g0006290 Simmondsia chinensis HOM05D007970 ORTHO05D009943 1.4e-06 57.4 118 37.3
PGSC0003DMG400016417 Solanum tuberosum HOM05D006872 ORTHO05D006261 1.4e-06 57.4 65 49.2
VMungo0720G0028 Vigna mungo HOM05D006872 ORTHO05D006261 1.4e-06 57.4 78 38.5
Ciclev10013044m.g Citrus clementina HOM05D006872 ORTHO05D006261 1.8e-06 57.0 95 42.1
Lj1g0011262 Lotus japonicus HOM05D006872 ORTHO05D006261 1.8e-06 57.0 72 40.3
Rhsim04G0129900 Rhododendron simsii HOM05D006872 ORTHO05D006261 1.8e-06 57.0 68 50.0
CANSAT64G1977 Cannabis sativa HOM05D006872 ORTHO05D006261 2.3e-06 56.6 91 42.9
DCAR_022819 Daucus carota HOM05D046813 ORTHO05D009943 2.3e-06 56.6 92 39.1
DCAR_022820 Daucus carota HOM05D046813 ORTHO05D009943 2.3e-06 56.6 92 39.1
Sed0000741 Sechium edule HOM05D006872 ORTHO05D006261 2.3e-06 56.6 68 47.1
Solyc01g007770.2 Solanum lycopersicum HOM05D006872 ORTHO05D006261 3.0e-06 56.2 71 45.1
Sopen01g003310 Solanum pennellii HOM05D006872 ORTHO05D006261 3.0e-06 56.2 71 45.1
Thecc.05G100900 Theobroma cacao HOM05D006872 ORTHO05D006261 3.0e-06 56.2 84 40.5
Hma1.2p1_1442F.1_g283790 Hydrangea macrophylla HOM05D006872 ORTHO05D006261 6.7e-06 55.1 62 50.0
Potri.006G205200 Populus trichocarpa HOM05D006872 ORTHO05D006261 6.7e-06 55.1 65 52.3


User provided reference genes

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