Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.0e-59 232.3 117 100.0
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 9.7e-59 229.9 117 98.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 4.7e-53 211.1 115 89.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 5.0e-47 191.0 117 82.1
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.1e-46 189.9 116 78.4
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.9e-46 189.1 117 81.2
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.4e-44 183.0 116 77.6
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 2.0e-43 179.1 114 76.3
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 1.7e-42 176.0 116 75.0
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 8.3e-42 173.7 111 75.7
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 1.4e-41 172.9 111 77.5
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.0e-40 169.1 113 76.1
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.5e-40 167.9 111 72.1
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 4.5e-40 167.9 111 73.9
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 5.9e-40 167.5 116 71.6
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 5.9e-40 167.5 109 73.4
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 7.7e-40 167.2 114 71.9
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.0e-39 166.8 109 73.4
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.3e-39 166.4 118 68.6
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.3e-39 166.4 111 73.0
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.3e-39 166.4 120 70.8
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.3e-39 165.6 112 71.4
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 2.3e-39 165.6 104 78.8
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 3.8e-39 164.9 115 73.0
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 6.6e-39 164.1 110 71.8
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 8.6e-39 163.7 113 71.7
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 1.1e-38 163.3 114 68.4
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.1e-38 163.3 114 71.9
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.5e-38 162.9 112 71.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.9e-38 162.5 108 74.1
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.9e-38 162.5 112 70.5
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.5e-38 162.2 122 69.7
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 2.5e-38 162.2 107 69.2
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 3.3e-38 161.8 118 67.8
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.3e-38 161.8 110 74.5
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 4.2e-38 161.4 114 70.2
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 5.5e-38 161.0 101 76.2
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 7.2e-38 160.6 115 67.8
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 7.2e-38 160.6 117 69.2
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 7.2e-38 160.6 117 69.2
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 7.2e-38 160.6 117 69.2
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 9.5e-38 160.2 99 78.8
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.2e-37 159.8 108 67.6
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.2e-37 159.8 100 74.0
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.6e-37 159.5 117 67.5
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 2.1e-37 159.1 113 72.6
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.1e-37 159.1 92 79.3
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.1e-37 159.1 106 72.6
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.1e-37 159.1 117 69.2
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 3.6e-37 158.3 117 67.5
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 3.6e-37 158.3 114 70.2
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 3.6e-37 158.3 114 70.2
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 3.6e-37 158.3 115 72.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 4.7e-37 157.9 111 71.2
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 4.7e-37 157.9 115 71.3
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 4.7e-37 157.9 114 64.0
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 6.1e-37 157.5 114 67.5
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 6.1e-37 157.5 112 71.4
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 6.1e-37 157.5 116 68.1
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 8.0e-37 157.1 98 76.5
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.0e-36 156.8 118 66.1
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.0e-36 156.8 104 74.0
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.0e-36 156.8 104 74.0
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 1.0e-36 156.8 117 65.8
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.0e-36 156.8 122 65.6
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.4e-36 156.4 92 79.3
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.8e-36 156.0 98 76.5
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.8e-36 156.0 98 76.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 3.0e-36 155.2 100 75.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 3.0e-36 155.2 102 70.6
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 3.0e-36 155.2 111 66.7
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 4.0e-36 154.8 115 69.6
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 5.2e-36 154.5 114 67.5
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 5.2e-36 154.5 114 66.7
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 1.2e-35 153.3 111 67.6
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 1.5e-35 152.9 115 67.8
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 1.5e-35 152.9 112 69.6
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 2.6e-35 152.1 115 65.2
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 4.4e-35 151.4 111 67.6
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 4.4e-35 151.4 91 79.1
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 5.7e-35 151.0 101 71.3
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.2e-34 149.1 114 64.0
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.8e-34 148.7 77 87.0
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 7.0e-33 144.1 76 86.8
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 9.2e-33 143.7 76 85.5
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 2.0e-32 142.5 111 64.0
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.7e-32 142.1 94 71.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 7.8e-32 140.6 115 64.3
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 6.6e-31 137.5 107 69.2
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.9e-30 136.0 76 81.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 5.6e-30 134.4 79 77.2
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 9.5e-30 133.7 76 80.3
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 2.8e-29 132.1 92 67.4
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 3.6e-29 131.7 93 65.6
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 4.0e-28 128.3 90 66.7
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 8.9e-28 127.1 87 66.7
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.2e-27 126.7 100 69.0
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 2.0e-27 125.9 107 58.9
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 3.7e-26 121.7 91 67.0
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 2.7e-24 115.5 113 54.0
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.9e-22 109.4 102 49.0
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 8.0e-21 104.0 131 45.0
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.1e-20 102.1 87 55.2
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 5.4e-17 91.3 110 50.0
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 3.5e-16 88.6 76 55.3
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.3e-15 85.9 111 40.5
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 3.7e-10 68.6 96 40.6
QL05p056380 Quercus lobata HOM05D005741 ORTHO05D007240 2.5e-06 55.8 36 77.8
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 5.6e-06 54.7 75 37.3


User provided reference genes

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