Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 2.1e-305 1051.6 553 100.0
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 3.9e-235 818.1 505 85.9
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 5.3e-224 781.2 515 82.7
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 3.5e-215 751.9 518 79.7
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.3e-214 749.2 504 78.6
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 1.2e-212 743.4 504 78.6
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 2.2e-209 732.6 502 77.3
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 7.3e-205 717.6 502 75.9
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 4.0e-203 711.8 506 75.3
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 5.2e-203 711.4 505 75.8
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 8.9e-203 710.7 508 74.8
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 8.9e-203 710.7 501 75.4
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 3.4e-202 708.8 503 74.4
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 4.4e-202 708.4 502 76.3
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 7.5e-202 707.6 501 76.0
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 9.8e-202 707.2 500 76.0
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 2.2e-201 706.1 519 73.0
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 4.9e-201 704.9 508 74.0
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 4.9e-201 704.9 505 76.2
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 1.1e-200 703.7 500 75.0
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 2.4e-200 702.6 501 75.4
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 1.2e-199 700.3 498 76.5
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 7.8e-199 697.6 506 76.1
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 2.5e-197 692.6 507 73.4
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 9.5e-197 690.6 503 74.0
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 1.2e-196 690.3 488 75.0
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 2.1e-196 689.5 500 73.8
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 3.6e-196 688.7 499 73.5
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 2.3e-195 686.0 500 74.6
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.2e-194 683.7 508 72.4
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.5e-194 683.3 504 72.8
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 3.9e-190 668.7 506 68.8
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 2.5e-189 666.0 504 69.6
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 4.3e-189 665.2 506 71.7
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 7.3e-189 664.5 506 71.9
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 7.3e-189 664.5 501 71.7
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 3.6e-188 662.1 499 69.9
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 2.6e-186 656.0 574 67.1
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 2.6e-186 656.0 504 69.2
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.7e-185 653.3 504 70.0
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 1.7e-185 653.3 503 69.6
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 2.9e-185 652.5 504 69.6
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 6.4e-185 651.4 499 70.7
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 8.3e-185 651.0 499 69.3
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 1.1e-184 650.6 499 68.7
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 2.4e-184 649.4 497 68.6
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 2.4e-184 649.4 478 71.3
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 7.1e-184 647.9 504 69.4
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.6e-183 646.7 505 69.3
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 2.1e-183 646.4 507 69.4
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 4.6e-183 645.2 503 72.0
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 6.0e-183 644.8 498 69.5
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 4.3e-181 638.6 499 69.1
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 4.3e-181 638.6 495 68.7
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 3.6e-180 635.6 525 65.5
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 3.6e-180 635.6 500 69.0
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 3.1e-179 632.5 503 68.8
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 6.8e-179 631.3 501 68.5
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 5.8e-178 628.2 501 68.3
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 9.9e-178 627.5 505 67.9
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 2.2e-177 626.3 501 68.3
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 2.9e-177 625.9 509 68.2
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 1.1e-176 624.0 442 77.1
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 5.4e-176 621.7 559 63.9
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 2.1e-175 619.8 502 66.1
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 3.9e-174 615.5 504 67.1
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 1.3e-172 610.5 461 72.2
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 2.8e-172 609.4 519 64.0
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 3.6e-172 609.0 496 66.1
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 1.4e-171 607.1 501 68.5
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 1.4e-171 607.1 463 71.7
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 4.2e-168 595.5 478 69.7
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 1.0e-166 590.9 411 77.9
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.3e-165 585.9 474 69.2
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.0e-162 576.6 454 70.7
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 7.6e-162 574.7 498 62.4
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 9.9e-162 574.3 502 65.5
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 1.2e-159 567.4 499 61.9
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 9.6e-157 557.8 523 61.0
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 1.3e-156 557.4 486 65.4
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 2.0e-154 550.1 439 69.9
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 7.6e-154 548.1 414 72.5
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 4.9e-153 545.4 476 64.1
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 7.1e-152 541.6 494 61.9
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 7.1e-152 541.6 472 64.6
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 5.7e-133 478.8 349 71.1
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 1.5e-130 470.7 366 71.9
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 4.8e-124 449.1 332 71.7
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.5e-112 410.2 504 51.6
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 2.8e-100 370.2 504 45.0
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 1.6e-98 364.4 477 49.5
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 2.9e-97 360.1 328 62.2
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 8.6e-97 358.6 283 67.8
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 3.7e-92 343.2 262 70.6
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.3e-84 318.2 239 72.0
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 2.3e-78 297.4 256 64.8
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 8.9e-70 268.9 244 65.6
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 2.0e-69 267.7 169 81.1
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 9.9e-69 265.4 204 64.7
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 4.7e-63 246.5 153 81.0
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 1.1e-62 245.4 212 63.7
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 1.3e-55 221.9 154 72.7
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 4.8e-55 219.9 170 70.0
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 8.7e-49 199.1 154 70.1
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 3.5e-42 177.2 145 68.3
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 8.1e-39 166.0 499 30.9
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.9e-35 154.8 172 53.5
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 5.7e-32 143.3 95 82.1
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 6.3e-31 139.8 93 81.7
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 9.0e-30 136.0 90 77.8
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 7.6e-29 132.9 93 79.6
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.3e-25 121.3 79 77.2
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 6.7e-25 119.8 72 84.7
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 4.5e-21 107.1 74 77.0
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 1.7e-20 105.1 68 73.5
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 6.5e-20 103.2 99 58.6
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.4e-14 85.5 59 78.0
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 2.6e-13 81.3 57 75.4
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 2.1e-10 71.6 46 69.6
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 1.8e-09 68.6 92 51.1


User provided reference genes

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