Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030235 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-68 262.3 126 100.0
CSS0023154 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.0e-67 256.9 126 97.6
CSS0000056 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-65 251.5 125 96.0
CSS0027143 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.8e-63 245.7 126 93.7
CSS0019964 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.5e-62 241.5 126 93.7
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-59 233.0 116 95.7
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.0e-58 229.9 116 94.8
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.3e-58 228.8 116 94.8
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.4e-57 224.6 116 92.2
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.7e-56 222.6 116 92.2
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.3e-56 220.3 116 91.4
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.3e-45 186.4 116 81.9
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 2.7e-22 109.0 85 60.0
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 6.0e-22 107.8 85 58.8
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 2.3e-21 105.9 116 44.8
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 9.6e-20 100.5 116 44.8
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 1.7e-16 89.7 85 45.9
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.4e-15 85.9 109 45.0
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.4e-15 85.9 109 45.0
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.4e-15 85.9 109 45.0
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 1.7e-13 79.7 94 41.5
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.9e-13 78.6 105 40.0
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.5e-12 76.6 82 41.5
vmacro09403 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.3e-12 75.5 93 41.9
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 5.6e-12 74.7 110 39.1
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.4e-12 74.3 107 38.3
Lj9A299T35 Lonicera japonica HOM05D001309 ORTHO05D000385 1.6e-11 73.2 101 40.6
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.6e-11 72.0 75 40.0
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 6.2e-11 71.2 78 44.9
Gohir.A12G105966 Gossypium hirsutum HOM05D040140 ORTHO05D000385 1.4e-10 70.1 108 35.2
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.8e-10 69.7 95 37.9
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.4e-10 69.3 95 37.9
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-10 69.3 84 35.7
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 5.3e-10 68.2 101 34.7
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-10 68.2 102 35.3
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-10 68.2 76 35.5
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 9.0e-10 67.4 95 36.8
MELO3C032241.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.5e-09 66.6 80 42.5
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 2.0e-09 66.2 101 32.7
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-09 66.2 76 35.5
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.6e-09 65.9 93 37.6
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.5e-09 65.1 104 35.6
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.5e-09 65.1 75 37.3
Dinv05901 Davidia involucrata HOM05D014212 ORTHO05D000385 7.6e-09 64.3 70 44.3
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 7.6e-09 64.3 109 38.5
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 9.9e-09 63.9 98 35.7
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 1.3e-08 63.5 78 39.7
MELO3C027653.2 Cucumis melo HOM05D001963 ORTHO05D001863 1.3e-08 63.5 82 40.2
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 1.3e-08 63.5 105 34.3
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.7e-08 63.2 100 38.0
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 2.2e-08 62.8 73 41.1
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.2e-08 62.8 109 33.9
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 2.2e-08 62.8 109 34.9
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.2e-08 62.8 80 35.0
PGSC0003DMG400015737 Solanum tuberosum HOM05D001309 ORTHO05D000385 2.2e-08 62.8 78 42.3
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 2.9e-08 62.4 109 33.9
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.9e-08 62.4 120 33.3
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 2.9e-08 62.4 93 36.6
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.9e-08 62.4 77 40.3
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 2.9e-08 62.4 86 37.2
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.9e-08 61.6 101 34.7
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.9e-08 61.6 101 34.7
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.9e-08 61.6 60 45.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.9e-08 61.6 74 39.2
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 6.4e-08 61.2 93 37.6
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 6.4e-08 61.2 97 33.0
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.4e-08 61.2 78 34.6
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.4e-08 61.2 59 45.8
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.4e-08 61.2 105 31.4
Ca_18931_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 8.4e-08 60.8 101 31.7
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.4e-07 60.1 72 40.3
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 1.4e-07 60.1 89 36.0
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-07 60.1 112 32.1
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.4e-07 60.1 107 30.8
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-07 59.7 79 35.4
MELO3C028785.2 Cucumis melo HOM05D000539 ORTHO05D000233 1.9e-07 59.7 82 40.2
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-07 59.7 60 43.3
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 2.4e-07 59.3 117 31.6
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.4e-07 59.3 60 43.3
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-07 58.9 72 38.9
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-07 58.9 70 38.6
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-07 58.9 72 38.9
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-07 58.9 70 38.6
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-07 58.9 72 38.9
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 4.2e-07 58.5 101 35.6
arahy.Tifrunner.gnm1.ann1.PL7LDA Arachis hypogaea HOM05D010482 ORTHO05D000385 4.2e-07 58.5 101 35.6
MBI08_g25554_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.5e-07 58.2 107 29.0
PSO724G0149 Papaver somniferum HOM05D000616 ORTHO05D000233 5.5e-07 58.2 75 38.7
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 5.5e-07 58.2 111 32.4
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.1e-07 57.8 85 36.5
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.1e-07 57.8 72 38.9
COL.COLO4_08322 Corchorus olitorius HOM05D004615 ORTHO05D000385 7.1e-07 57.8 104 33.7
Lsat_1_v5_gn_9_120321 Lactuca sativa HOM05D005763 ORTHO05D005970 7.1e-07 57.8 107 33.6
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.1e-07 57.8 95 32.6
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 7.1e-07 57.8 71 39.4
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 9.3e-07 57.4 118 30.5
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 9.3e-07 57.4 109 31.2
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-06 57.0 72 37.5
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.2e-06 57.0 119 29.4
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.2e-06 57.0 72 38.9
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 1.2e-06 57.0 94 39.4
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.2e-06 57.0 114 28.1
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-06 56.6 72 37.5
ClCG09G008820 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.6e-06 56.6 101 37.6
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.6e-06 56.6 101 31.7
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.1e-06 56.2 77 33.8
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 2.1e-06 56.2 122 29.5
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 2.1e-06 56.2 122 29.5
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.1e-06 56.2 132 32.6
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.1e-06 56.2 73 37.0
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 2.7e-06 55.8 92 35.9
Gohir.A01G193333 Gossypium hirsutum HOM05D021375 ORTHO05D022808 2.7e-06 55.8 77 33.8
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.7e-06 55.8 73 37.0
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 2.7e-06 55.8 112 32.1
Sed0011713 Sechium edule HOM05D000539 ORTHO05D000233 2.7e-06 55.8 87 37.9
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.5e-06 55.5 71 36.6
Ca_08868_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 4.6e-06 55.1 80 35.0
ECA247G2658 Erigeron canadensis HOM05D001309 ORTHO05D000385 4.6e-06 55.1 79 30.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 4.6e-06 55.1 104 30.8
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.6e-06 55.1 79 34.2
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.6e-06 55.1 91 36.3
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 6.0e-06 54.7 94 35.1
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.0e-06 54.7 93 29.0
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 7.9e-06 54.3 65 38.5
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.9e-06 54.3 48 47.9
MBI12_g08677_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000385 7.9e-06 54.3 78 29.5
MBI14_g03113_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-06 54.3 60 38.3


User provided reference genes

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