Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.7e-65 251.9 133 100.0
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.5e-65 251.5 133 99.2
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.5e-59 230.7 133 91.7
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-58 229.6 135 90.4
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-58 229.2 134 91.0
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.6e-57 224.9 135 91.1
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.5e-55 219.5 135 89.6
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-54 214.9 135 87.4
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-51 206.1 131 86.3
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.5e-51 203.8 133 84.2
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 6.3e-14 81.3 98 41.8
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.2e-13 79.0 95 50.5
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 9.2e-13 77.4 111 43.2
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 1.2e-12 77.0 106 43.4
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 2.0e-12 76.3 102 40.2
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.3e-11 73.6 74 52.7
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 2.9e-11 72.4 94 44.7
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.9e-11 72.4 77 48.1
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 2.9e-11 72.4 104 42.3
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 4.3e-10 68.6 112 35.7
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 5.6e-10 68.2 108 40.7
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 5.6e-10 68.2 117 41.9
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 7.3e-10 67.8 93 40.9
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 9.5e-10 67.4 97 38.1
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.5e-10 67.4 80 43.8
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.2e-09 67.0 128 34.4
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.1e-09 66.2 81 44.4
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.8e-09 65.9 97 36.1
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 4.7e-09 65.1 115 43.5
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 6.1e-09 64.7 93 38.7
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 1.0e-08 63.9 97 44.3
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.0e-08 63.9 102 38.2
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.4e-08 63.5 102 38.2
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 2.3e-08 62.8 98 34.7
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.0e-08 62.0 86 41.9
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 4.0e-08 62.0 99 39.4
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 5.2e-08 61.6 97 35.1
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.2e-08 61.6 75 45.3
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.2e-07 60.5 123 32.5
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.5e-07 60.1 98 36.7
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 1.5e-07 60.1 91 38.5
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.5e-07 60.1 121 37.2
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.0e-07 59.7 106 36.8
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 2.0e-07 59.7 90 37.8
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 3.4e-07 58.9 123 32.5
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 7.5e-07 57.8 111 38.7
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 9.8e-07 57.4 127 33.9
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 1.3e-06 57.0 75 45.3
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.3e-06 57.0 96 36.5
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 1.3e-06 57.0 98 32.7
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 1.7e-06 56.6 82 40.2
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.7e-06 56.6 116 36.2
Atru.chr4.1346 Acer truncatum HOM05D058995 ORTHO05D010043 2.2e-06 56.2 102 35.3
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 2.2e-06 56.2 97 36.1
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 2.2e-06 56.2 103 36.9
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.2e-06 56.2 122 35.2
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.9e-06 55.8 127 31.5
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.9e-06 55.8 127 31.5
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.7e-06 55.5 99 36.4
Ciclev10022667m.g Citrus clementina HOM05D017113 ORTHO05D019028 8.3e-06 54.3 105 35.2


User provided reference genes

Program Settings