Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.6e-127 458.8 240 100.0
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.7e-122 440.3 252 94.0
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 5.0e-118 427.9 252 86.9
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 8.8e-115 417.2 252 85.3
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 8.3e-89 330.9 252 69.8
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 5.0e-86 321.6 249 69.1
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 4.9e-81 305.1 257 63.4
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 8.9e-75 284.3 277 58.5
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 9.8e-74 280.8 253 57.7
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 3.0e-70 269.2 246 59.8
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 8.6e-70 267.7 247 57.9
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 9.5e-69 264.2 252 57.1
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 9.5e-69 264.2 247 56.7
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.6e-68 263.5 250 58.4
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 2.8e-68 262.7 186 71.0
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 3.6e-68 262.3 188 69.1
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 3.6e-68 262.3 251 56.6
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 4.7e-68 261.9 253 54.5
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 1.4e-67 260.4 250 56.4
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.3e-67 259.6 250 56.8
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 3.1e-67 259.2 247 56.7
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 4.0e-67 258.8 260 56.2
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 6.8e-67 258.1 252 55.6
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 8.9e-67 257.7 250 56.4
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 1.5e-66 256.9 251 56.2
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 2.0e-66 256.5 249 57.4
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 3.4e-66 255.8 248 57.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 2.2e-65 253.1 250 54.8
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 2.2e-65 253.1 249 55.8
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 3.8e-65 252.3 254 53.1
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 8.4e-65 251.1 192 65.6
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.1e-64 250.8 197 65.5
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.4e-64 249.6 250 55.6
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 3.2e-64 249.2 251 55.0
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 4.1e-64 248.8 258 53.9
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 7.1e-64 248.1 250 55.6
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 7.1e-64 248.1 255 52.9
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 7.1e-64 248.1 248 55.6
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 9.2e-64 247.7 251 55.8
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 1.2e-63 247.3 191 65.4
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.6e-63 246.9 198 63.6
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 2.1e-63 246.5 194 66.5
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 2.1e-63 246.5 242 55.4
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 3.5e-63 245.7 246 54.1
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 4.6e-63 245.4 253 53.8
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 6.0e-63 245.0 188 67.0
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 6.0e-63 245.0 187 65.8
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 7.8e-63 244.6 191 66.5
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 7.8e-63 244.6 191 65.4
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 1.0e-62 244.2 191 64.9
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.3e-62 243.8 187 65.8
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.3e-62 243.8 198 62.6
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.7e-62 243.4 190 65.8
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 2.3e-62 243.0 250 53.2
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 5.1e-62 241.9 246 52.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 6.6e-62 241.5 187 65.2
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 6.6e-62 241.5 191 63.4
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.1e-61 240.7 198 62.6
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 1.1e-61 240.7 249 53.8
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.5e-61 240.4 250 53.6
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 7.3e-61 238.0 237 54.0
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.2e-60 237.3 198 62.1
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 1.6e-60 236.9 246 50.4
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.6e-60 236.9 250 53.2
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 2.1e-60 236.5 259 52.1
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 2.1e-60 236.5 254 52.8
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 4.7e-60 235.3 249 53.0
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 6.2e-60 235.0 258 51.9
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 1.4e-59 233.8 181 64.6
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.8e-59 233.4 252 51.6
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 1.2e-58 230.7 256 50.8
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 1.5e-58 230.3 172 70.9
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 7.6e-58 228.0 184 63.6
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 3.8e-57 225.7 250 50.8
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.1e-56 224.2 196 59.2
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 1.4e-56 223.8 192 58.3
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 2.3e-54 216.5 253 48.6
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 1.5e-53 213.8 191 56.5
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 3.3e-53 212.6 189 60.8
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 2.1e-52 209.9 229 52.0
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.8e-51 206.8 196 57.1
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 4.0e-51 205.7 196 57.1
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.2e-50 204.1 189 58.7
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.5e-50 203.8 222 52.3
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 3.4e-50 202.6 197 55.3
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 3.4e-50 202.6 197 55.3
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 7.6e-50 201.4 196 56.6
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.7e-49 200.3 190 57.9
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 2.2e-49 199.9 229 49.8
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 2.2e-49 199.9 187 56.7
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 1.0e-46 191.0 186 55.4
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 1.8e-46 190.3 144 66.7
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.5e-45 187.2 150 64.0
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 3.3e-45 186.0 180 51.7
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 2.1e-44 183.3 189 50.3
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 4.8e-44 182.2 192 52.6
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.8e-43 180.3 246 42.7
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 2.2e-41 173.3 183 49.7
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 3.8e-41 172.6 180 48.9
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 1.8e-38 163.7 182 45.1
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 1.3e-36 157.5 204 46.6
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 4.8e-36 155.6 190 44.7
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.2e-34 151.0 198 46.0
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-34 151.0 182 44.5
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 1.5e-34 150.6 215 40.5
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 2.0e-34 150.2 154 50.6
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 8.4e-33 144.8 180 48.3
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 7.1e-32 141.7 136 58.1
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.5e-29 134.0 258 33.3
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.0e-22 109.8 188 37.8
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 5.7e-21 105.5 161 38.5
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.1e-19 101.3 88 63.6
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 1.4e-16 90.9 86 54.7
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-15 87.8 97 44.3
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 3.1e-11 73.2 112 40.2
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 2.6e-10 70.1 78 51.3
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 2.2e-09 67.0 45 68.9
Oeu004139.1 Olea europaea HOM05D007174 ORTHO05D009061 4.7e-07 59.3 91 38.5
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 2.3e-06 57.0 44 59.1


User provided reference genes

Program Settings