Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.7e-284 981.9 462 100.0
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.7e-284 981.9 462 100.0
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.4e-262 909.1 460 92.6
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.2e-256 889.4 460 89.3
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 5.8e-256 887.1 460 88.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 5.8e-256 887.1 460 89.3
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 5.8e-256 887.1 460 89.6
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.7e-255 885.6 460 90.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.7e-255 884.4 460 88.3
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.9e-254 882.1 476 85.9
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.2e-254 881.3 460 88.7
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-253 878.2 460 87.2
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 1.7e-252 875.5 460 87.6
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.9e-252 874.4 460 87.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.9e-252 874.4 460 86.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 5.1e-252 874.0 460 88.3
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 5.1e-252 874.0 462 87.7
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-251 872.5 460 87.8
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 1.9e-251 872.1 460 87.0
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 9.6e-251 869.8 460 88.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.1e-250 868.6 460 87.6
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 3.6e-250 867.8 460 86.3
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 8.1e-250 866.7 460 87.6
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 5.2e-249 864.0 460 86.7
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.2e-249 864.0 460 86.5
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.5e-248 862.4 460 87.2
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.5e-248 862.4 461 86.6
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 2.6e-248 861.7 460 85.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 5.8e-248 860.5 460 86.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 7.6e-248 860.1 460 86.7
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 7.6e-248 860.1 460 87.2
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.3e-247 859.4 460 86.5
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 4.9e-247 857.4 460 85.9
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.4e-246 855.9 460 86.5
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.9e-246 855.5 461 85.2
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.9e-246 855.5 460 86.3
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.5e-245 851.3 460 84.3
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 4.6e-245 850.9 460 85.9
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.3e-244 849.4 462 85.7
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 2.3e-244 848.6 460 85.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.1e-243 846.3 462 83.8
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 4.3e-243 844.3 460 84.8
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 7.3e-243 843.6 460 84.1
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 7.3e-243 843.6 460 83.9
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 8.1e-242 840.1 460 83.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 3.1e-241 838.2 460 84.6
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 3.1e-241 838.2 481 81.7
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 6.9e-241 837.0 460 84.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 3.4e-240 834.7 460 83.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 4.4e-240 834.3 460 82.8
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 82.6
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.3e-239 832.8 458 84.1
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 3.8e-239 831.2 460 84.6
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.4e-238 829.3 462 83.1
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 5.4e-238 827.4 461 81.6
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 7.1e-238 827.0 460 82.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 7.1e-238 827.0 460 82.2
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 1.7e-236 822.4 460 82.6
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 2.3e-236 822.0 453 83.2
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 7.3e-235 817.0 460 81.7
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.6e-234 814.7 460 81.1
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 6.2e-234 813.9 443 83.5
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 81.3
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 81.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.1e-233 813.1 460 83.3
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.4e-233 812.0 460 83.0
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.0e-233 811.2 460 82.6
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.5e-232 809.3 461 80.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 9.9e-232 806.6 460 80.7
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 81.3
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 80.7
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.2e-229 799.7 487 76.8
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.2e-229 799.7 460 81.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.7e-229 798.5 463 79.3
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 1.1e-225 786.6 460 80.4
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 5.3e-225 784.3 460 80.4
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 6.9e-225 783.9 498 75.1
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 7.6e-224 780.4 460 77.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.2e-221 773.1 462 79.9
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 3.3e-219 765.0 464 75.0
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.4e-217 758.8 463 75.6
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 7.6e-216 753.8 460 76.5
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 5.7e-203 711.1 498 67.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 9.1e-201 703.7 460 72.6
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.6e-200 702.2 461 71.8
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.1e-190 670.2 454 66.7
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 3.6e-189 665.2 392 77.8
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 6.1e-189 664.5 461 64.6
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-187 660.2 461 64.6
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.6e-187 659.1 338 89.6
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.3e-186 656.8 341 88.9
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.5e-184 648.3 338 88.8
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.7e-183 646.4 338 88.8
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.2e-183 646.0 323 92.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.9e-183 645.6 460 63.3
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.8e-183 645.2 339 87.9
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-182 643.3 339 87.9
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 7.2e-182 641.0 342 88.0
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 7.2e-182 641.0 342 88.0
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.8e-178 629.0 462 61.5
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.7e-176 622.5 337 86.1
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.0e-172 608.6 337 84.3
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-168 596.7 311 87.8
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.7e-162 575.5 465 55.3
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.7e-154 550.1 300 86.0
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 6.4e-154 548.1 337 78.3
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 5.0e-151 538.5 313 81.8
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 8.6e-151 537.7 291 85.2
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.1e-149 533.1 291 86.9
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.7e-143 513.5 276 84.4
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.5e-134 483.8 339 63.4
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.8e-132 476.9 290 76.2
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.8e-108 397.1 450 42.4
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.9e-98 363.2 484 38.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.5e-73 281.2 160 80.0
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.0e-55 220.3 110 90.0
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.0e-55 220.3 110 90.0
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-55 219.2 110 89.1
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 8.3e-53 212.2 163 63.2
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.3e-41 173.3 99 84.8
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 2.3e-10 71.2 40 77.5


User provided reference genes

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