Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.5e-272 942.6 593 100.0
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 4.2e-267 924.5 593 98.7
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 8.2e-122 441.8 546 54.6
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 6.8e-116 422.2 573 57.8
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 1.1e-110 404.8 548 58.2
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 2.6e-107 393.7 552 55.6
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 1.6e-101 374.4 561 55.6
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 5.4e-73 279.6 599 43.6
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 4.6e-72 276.6 493 44.2
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.2e-69 268.5 576 39.9
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 1.4e-60 238.4 588 38.6
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 1.8e-60 238.0 602 41.0
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.0e-59 234.6 585 42.4
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 2.0e-59 234.6 514 40.3
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 2.6e-59 234.2 644 38.0
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.5e-59 233.4 590 41.7
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 1.6e-56 224.9 587 42.9
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.6e-56 223.4 507 39.6
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 3.3e-54 217.2 590 40.7
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 1.3e-53 215.3 493 38.9
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 6.2e-53 213.0 585 40.5
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 3.1e-52 210.7 398 43.0
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 4.0e-52 210.3 601 36.1
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 6.9e-52 209.5 556 37.1
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 9.3e-49 199.1 683 33.1
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 1.6e-48 198.4 477 38.6
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 2.7e-48 197.6 579 34.7
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 6.0e-48 196.4 469 37.1
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 6.7e-47 193.0 617 35.8
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 1.5e-46 191.8 703 34.4
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 7.4e-46 189.5 531 35.6
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 5.3e-44 183.3 573 35.3
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 2.0e-43 181.4 553 35.8
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 4.9e-42 176.8 483 37.3
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 8.4e-42 176.0 534 34.3
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 2.5e-41 174.5 477 36.1
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.1e-40 171.4 534 33.9
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 2.7e-40 171.0 444 36.9
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 8.7e-39 166.0 600 32.2
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 1.1e-38 165.6 651 33.8
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 4.3e-38 163.7 435 38.2
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 2.2e-37 161.4 455 36.0
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 2.8e-37 161.0 576 31.4
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 1.4e-36 158.7 655 35.0
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 1.7e-34 151.8 568 32.7
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.1e-33 149.1 470 32.6
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 1.4e-33 148.7 517 33.7
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 1.6e-32 145.2 510 32.5
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 2.1e-32 144.8 474 36.3
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 2.1e-32 144.8 443 34.1
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 3.0e-31 141.0 572 33.2
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 3.0e-31 141.0 491 33.0
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 4.3e-30 137.1 684 31.9
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 3.1e-28 131.0 510 32.2
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 4.1e-28 130.6 474 33.8
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 2.6e-27 127.9 346 36.1
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 4.5e-27 127.1 585 31.3
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 7.7e-27 126.3 476 31.5
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 1.0e-26 125.9 577 34.0
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 2.2e-26 124.8 507 32.0
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 8.5e-26 122.9 480 33.1
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.4e-25 122.1 500 32.8
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.9e-25 121.7 446 32.1
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 9.4e-25 119.4 568 33.3
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 1.0e-23 115.9 502 32.7
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 1.7e-21 108.6 481 31.0
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 3.7e-21 107.5 577 32.8
Peaxi162Scf00069g01735 Petunia axillaris HOM05D021138 ORTHO05D009211 4.8e-21 107.1 456 33.3
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 6.3e-21 106.7 469 33.0
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 1.5e-19 102.1 444 32.7
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 2.6e-19 101.3 660 32.3
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 5.9e-19 100.1 451 32.2
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 1.9e-17 95.1 390 29.7
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 1.2e-16 92.4 341 32.8
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 1.6e-16 92.0 489 29.7
Nitab4.5_0005017g0030 Nicotiana tabacum HOM05D021138 ORTHO05D009211 6.1e-16 90.1 475 29.9
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 2.3e-15 88.2 426 27.7
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 3.0e-15 87.8 489 29.9
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 1.1e-14 85.9 426 27.5
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 7.4e-14 83.2 426 27.7
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 9.7e-14 82.8 386 27.5
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 3.7e-13 80.9 386 27.5
SGA_v2.0_scaffold73G24235 Striga asiatica HOM05D007892 ORTHO05D009211 3.1e-12 77.8 448 28.3
Oeu051084.1 Olea europaea HOM05D007892 ORTHO05D009211 1.6e-11 75.5 189 34.9
PSO541G2379 Papaver somniferum HOM05D056025 ORTHO05D009211 2.0e-11 75.1 574 25.8
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 3.5e-11 74.3 62 64.5
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 2.9e-10 71.2 220 35.5
Carub.0008s1424 Capsella rubella HOM05D012500 ORTHO05D009211 4.2e-09 67.4 447 26.8
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 3.6e-08 64.3 129 39.5
AT5G53930 Arabidopsis thaliana HOM05D012500 ORTHO05D009211 6.1e-08 63.5 470 27.0
unitig_37.g12567 Utricularia gibba HOM05D007892 ORTHO05D009211 6.1e-08 63.5 464 26.7
Aa31LG3G10020 Aethionema arabicum HOM05D012500 ORTHO05D009211 1.4e-07 62.4 449 26.7
AL8G29040 Arabidopsis lyrata HOM05D012500 ORTHO05D009211 8.8e-07 59.7 461 26.7
MSTRG.10462 Avicennia marina HOM05D007892 ORTHO05D009211 8.8e-07 59.7 123 41.5
Sp6g16010 Schrenkiella parvula HOM05D012500 ORTHO05D009211 1.2e-06 59.3 488 26.2
CDE11G0863 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 1.5e-06 58.9 267 31.1
BcaB05g22092 Brassica carinata HOM05D012500 ORTHO05D009211 3.4e-06 57.8 398 25.4


User provided reference genes

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