Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030183 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D028418 1.2e-26 122.5 62 100.0
CSS0032999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D028418 9.2e-24 112.8 65 92.3
Actinidia22418 Actinidia chinensis HOM05D000104 ORTHO05D006385 4.0e-11 70.9 44 79.5
Actinidia33653 Actinidia chinensis HOM05D000104 ORTHO05D006385 1.2e-10 69.3 43 79.1
QL11p013542 Quercus lobata HOM05D000104 ORTHO05D006385 2.6e-10 68.2 43 72.1
CSS0049241 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006385 7.5e-10 66.6 43 74.4
Lj2C344G7 Lonicera japonica HOM05D000104 ORTHO05D006385 9.8e-10 66.2 43 76.7
Haze_06104 Corylus avellana HOM05D000104 ORTHO05D006385 1.3e-09 65.9 43 69.8
Cfa000689 Carpinus fangiana HOM05D000104 ORTHO05D006385 1.7e-09 65.5 43 69.8
Dinv09066 Davidia involucrata HOM05D000104 ORTHO05D006385 1.7e-09 65.5 43 74.4
Duzib132G0144 Durio zibethinus HOM05D000104 ORTHO05D006385 6.4e-09 63.5 43 69.8
Gorai.008G049300 Gossypium raimondii HOM05D000104 ORTHO05D006385 8.3e-09 63.2 43 69.8
CiPaw.09G075000 Carya illinoinensis HOM05D000104 ORTHO05D006385 1.4e-08 62.4 43 69.8
CiPaw.10G063100 Carya illinoinensis HOM05D000104 ORTHO05D006385 3.2e-08 61.2 43 62.8
MELO3C007018.2 Cucumis melo HOM05D000104 ORTHO05D006385 3.2e-08 61.2 54 53.7
Rhsim02G0169000 Rhododendron simsii HOM05D000104 ORTHO05D006385 5.4e-08 60.5 42 69.0
Gohir.A12G048001 Gossypium hirsutum HOM05D000104 ORTHO05D006385 7.1e-08 60.1 43 67.4
vmacro11005 Vaccinium macrocarpon HOM05D000104 ORTHO05D006385 7.1e-08 60.1 43 67.4
Manes.16G060500 Manihot esculenta HOM05D000104 ORTHO05D006385 9.2e-08 59.7 43 62.8
COL.COLO4_17640 Corchorus olitorius HOM05D000104 ORTHO05D006385 1.2e-07 59.3 43 62.8
TWI15G0050 Tripterygium wilfordii HOM05D000104 ORTHO05D006385 1.6e-07 58.9 43 69.8
Cpa.g.sc30.142 Carica papaya HOM05D000104 ORTHO05D006385 2.1e-07 58.5 43 74.4
Duzib248G0971 Durio zibethinus HOM05D000104 ORTHO05D006385 2.1e-07 58.5 43 62.8
Potri.003G110100 Populus trichocarpa HOM05D000104 ORTHO05D006385 2.1e-07 58.5 43 67.4
RcHm_v2.0_Chr5g0020581 Rosa chinensis HOM05D000104 ORTHO05D006385 2.1e-07 58.5 43 67.4
GSVIVG01012117001 Vitis vinifera HOM05D000104 ORTHO05D006385 2.7e-07 58.2 43 69.8
Sabra01G0095100 Salix brachista HOM05D000104 ORTHO05D006385 3.5e-07 57.8 43 67.4
TAR626G0969 Trochodendron aralioides HOM05D000104 ORTHO05D006385 3.5e-07 57.8 43 67.4
Duzib052G0523 Durio zibethinus HOM05D000104 ORTHO05D006385 4.6e-07 57.4 42 61.9
Atru.chr10.483 Acer truncatum HOM05D000104 ORTHO05D006385 6.0e-07 57.0 43 65.1
Hma1.2p1_0181F.1_g079940 Hydrangea macrophylla HOM05D000104 ORTHO05D028418 7.8e-07 56.6 42 69.0
Potri.001G123400 Populus trichocarpa HOM05D000104 ORTHO05D006385 7.8e-07 56.6 43 69.8
TWI63G1682 Tripterygium wilfordii HOM05D000104 ORTHO05D006385 7.8e-07 56.6 43 67.4
FvH4_3g12610 Fragaria vesca HOM05D000104 ORTHO05D006385 1.0e-06 56.2 43 65.1
FAN16G3696 Fragaria x ananassa HOM05D000104 ORTHO05D006385 1.0e-06 56.2 43 65.1
FAN21G0261 Fragaria x ananassa HOM05D000104 ORTHO05D006385 1.0e-06 56.2 43 65.1
FAN25G1943 Fragaria x ananassa HOM05D000104 ORTHO05D006385 1.0e-06 56.2 43 65.1
MBI18_g05699_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D006385 1.0e-06 56.2 43 60.5
Sabra03G0076300 Salix brachista HOM05D000104 ORTHO05D006385 1.0e-06 56.2 43 65.1
CsaV3_6G052880 Cucumis sativus L. HOM05D000104 ORTHO05D006385 1.3e-06 55.8 43 58.1
Glyma.05G131500 Glycine max HOM05D000104 ORTHO05D006385 1.7e-06 55.5 43 62.8
THA.LOC104806217 Tarenaya hassleriana HOM05D000104 ORTHO05D006385 3.0e-06 54.7 41 68.3
Lalb_Chr07g0188451 Lupinus albus HOM05D000104 ORTHO05D006385 5.1e-06 53.9 43 62.8
ClCG01G025670 Citrullus lanatus HOM05D000104 ORTHO05D006385 6.6e-06 53.5 43 58.1
THA.LOC104812917 Tarenaya hassleriana HOM05D000104 ORTHO05D006385 6.6e-06 53.5 42 64.3
Medtr4g096930 Medicago truncatula HOM05D000104 ORTHO05D006385 8.6e-06 53.1 43 62.8


User provided reference genes

Program Settings