Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030166 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.2e-113 411.8 205 100.0
CSS0043105 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.6e-77 293.1 277 61.4
CSS0044430 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 2.4e-73 279.3 256 62.9
CSS0040916 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 1.3e-69 266.9 240 64.2
CSS0031147 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D008966 2.8e-69 265.8 240 63.8
CSS0028647 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.8e-61 239.2 225 63.6
CSS0032089 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.8e-53 212.6 245 57.1
CSS0021221 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.1e-40 168.3 172 59.3
CSS0026530 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.1e-40 168.3 172 59.3
CSS0005205 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.2e-29 131.3 215 39.5
CSS0012263 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 9.1e-28 127.9 215 38.6
CSS0030640 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.4e-23 114.0 208 36.5
CSS0039812 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.0e-23 112.8 202 39.1
CSS0018151 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.1e-20 102.8 209 34.4
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 1.7e-18 97.1 191 31.9
Rhsim04G0059700 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.9e-18 96.3 196 33.2
CSS0005720 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-17 94.4 190 34.2
Hma1.2p1_1264F.1_g271275 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-17 92.4 210 31.4
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 8.0e-16 88.2 137 40.1
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-15 87.0 257 31.1
Rhsim08G0130100 Rhododendron simsii HOM05D000187 ORTHO05D000230 1.8e-15 87.0 151 39.7
Hma1.2p1_0104F.1_g050035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-15 86.7 181 32.0
Lj2g0013559 Lotus japonicus HOM05D000017 ORTHO05D000013 2.3e-15 86.7 186 32.8
Cc06_g15030 Coffea canephora HOM05D000017 ORTHO05D000013 5.7e-14 82.0 188 29.3
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.8e-13 79.7 241 26.6
CSS0028814 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.9e-13 79.0 197 32.5
Lj5g0026532 Lotus japonicus HOM05D000017 ORTHO05D000013 1.2e-11 74.3 188 29.3
Dinv18500 Davidia involucrata HOM05D007604 ORTHO05D008966 2.0e-11 73.6 99 40.4
Lj3g0025866 Lotus japonicus HOM05D000017 ORTHO05D000013 1.7e-10 70.5 108 38.9
CSS0000907 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.3e-09 65.9 168 31.0
Peaxi162Scf00070g00037 Petunia axillaris HOM05D000017 ORTHO05D000013 5.6e-09 65.5 117 36.8
Rhsim13G0068100 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.6e-09 65.5 163 33.1
Atru.chr12.1107 Acer truncatum HOM05D000017 ORTHO05D000013 9.5e-09 64.7 130 32.3
Dinv13858 Davidia involucrata HOM05D007604 ORTHO05D008966 9.5e-09 64.7 107 37.4
vmacro08788 Vaccinium macrocarpon HOM05D000550 ORTHO05D000400 3.6e-08 62.8 175 30.3
Rhsim06G0119600 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.7e-08 62.4 235 26.4
Atru.chr3.730 Acer truncatum HOM05D000017 ORTHO05D000013 6.1e-08 62.0 244 25.8
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 1.0e-07 61.2 75 44.0
vmacro23380 Vaccinium macrocarpon HOM05D007604 ORTHO05D008966 1.0e-07 61.2 71 52.1
CANSAT35G0616 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-07 60.5 138 29.0
Rhsim02G0213500 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.3e-07 60.1 180 27.2
Hma1.2p1_0564F.1_g179090 Hydrangea macrophylla HOM05D000747 ORTHO05D007656 3.0e-07 59.7 205 26.8
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-06 57.4 239 23.8
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 3.4e-06 56.2 131 27.5
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.4e-06 56.2 167 28.1
Hma1.2p1_0327F.1_g126370 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.7e-06 55.5 114 27.2
Dinv05095 Davidia involucrata HOM05D007604 ORTHO05D008966 7.5e-06 55.1 91 42.9
CANSAT25G3827 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-06 54.7 118 31.4
CANSAT78G1044 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-06 54.7 118 31.4
Dinv10244 Davidia involucrata HOM05D007604 ORTHO05D008966 9.8e-06 54.7 98 36.7
Rhsim08G0098700 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.8e-06 54.7 108 32.4


User provided reference genes

Program Settings