Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.5e-35 149.8 78 100.0
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.7e-31 137.1 78 91.0
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 7.0e-29 130.2 78 87.2
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 9.1e-29 129.8 74 89.2
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.5e-28 127.9 77 85.7
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.3e-27 125.9 77 84.4
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.3e-27 125.9 77 84.4
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.5e-26 121.7 74 83.8
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.2e-26 120.9 74 85.1
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-25 119.4 70 88.6
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.6e-25 119.0 77 80.5
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.0e-24 116.3 70 85.7
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.4e-24 115.9 72 83.3
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 8.8e-24 113.2 74 79.7
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.8e-21 105.5 67 83.6
CSS0037680 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-17 92.8 57 78.9
CSS0012123 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-14 82.8 49 85.7
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 1.1e-13 79.7 72 54.2
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 3.2e-13 78.2 76 50.0
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-13 78.2 76 50.0
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-13 77.8 76 50.0
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-13 77.8 76 50.0
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-13 77.8 76 50.0
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.0e-13 77.0 76 48.7
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.0e-13 77.0 74 50.0
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.0e-13 77.0 76 48.7
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 7.0e-13 77.0 66 57.6
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.0e-13 77.0 66 57.6
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.2e-13 76.6 76 48.7
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.2e-13 76.6 72 52.8
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.2e-13 76.6 72 52.8
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-12 75.9 74 47.3
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-12 75.9 76 47.4
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-12 75.1 71 52.1
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-12 75.1 76 48.7
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-12 75.1 74 48.6
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-12 74.7 73 50.7
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-12 74.7 74 47.3
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 4.6e-12 74.3 77 49.4
CSS0030801 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.9e-12 73.9 45 82.2
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-12 73.6 70 50.0
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-12 73.6 76 46.1
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-11 73.2 65 58.5
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-11 72.8 74 54.1
CSS0006141 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-11 72.8 44 84.1
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-11 72.8 74 54.1
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-11 72.8 74 54.1
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.3e-11 72.0 69 52.2
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.9e-11 71.2 72 48.6
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-10 69.7 74 51.4
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 1.5e-10 69.3 79 48.1
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-10 69.3 72 47.2
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.5e-10 69.3 78 43.6
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 2.5e-10 68.6 67 49.3
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 3.3e-10 68.2 77 41.6
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 4.3e-10 67.8 72 47.2
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 4.3e-10 67.8 77 45.5
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 4.3e-10 67.8 73 46.6
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 9.5e-10 66.6 76 46.1
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 2.1e-09 65.5 66 47.0
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.1e-09 65.5 78 44.9
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.1e-09 65.5 77 42.9
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 2.8e-09 65.1 66 47.0
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-09 65.1 66 47.0
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 2.8e-09 65.1 66 47.0
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 2.8e-09 65.1 66 47.0
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 2.8e-09 65.1 66 47.0
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.8e-09 65.1 78 42.3
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 3.6e-09 64.7 66 45.5
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 4.7e-09 64.3 65 46.2
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 4.7e-09 64.3 66 47.0
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 4.7e-09 64.3 66 47.0
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 6.2e-09 63.9 71 43.7
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 6.2e-09 63.9 71 43.7
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 6.2e-09 63.9 67 46.3
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.2e-09 63.9 64 48.4
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.2e-09 63.9 64 48.4
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 6.2e-09 63.9 66 47.0
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 6.2e-09 63.9 63 49.2
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-09 63.9 66 45.5
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.2e-09 63.9 77 41.6
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-09 63.5 76 43.4
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 8.0e-09 63.5 66 45.5
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 8.0e-09 63.5 66 45.5
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 8.0e-09 63.5 66 48.5
MBI01_g37335_MAGBIO Magnolia biondii HOM05D009540 ORTHO05D000034 1.0e-08 63.2 65 47.7
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.4e-08 62.8 63 46.0
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 2.3e-08 62.0 76 40.8
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 3.1e-08 61.6 78 41.0
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 4.0e-08 61.2 66 43.9
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 4.0e-08 61.2 62 45.2
QL08p035596 Quercus lobata HOM05D000004 ORTHO05D000002 5.2e-08 60.8 77 41.6
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.2e-08 60.8 69 43.5
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 5.2e-08 60.8 76 43.4
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-08 60.5 70 42.9
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 8.9e-08 60.1 67 44.8
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.9e-08 60.1 69 43.5
CSS0002976 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-07 59.7 41 73.2
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 1.2e-07 59.7 70 41.4
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 1.2e-07 59.7 58 50.0
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 1.2e-07 59.7 58 50.0
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 1.2e-07 59.7 58 50.0
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 1.2e-07 59.7 66 43.9
QL05p075262 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-07 59.7 77 41.6
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.2e-07 59.7 77 39.0
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.2e-07 59.7 62 45.2
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.5e-07 59.3 77 35.1
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.5e-07 59.3 77 35.1
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.0e-07 58.9 69 43.5
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 2.0e-07 58.9 75 40.0
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.0e-07 58.9 62 43.5
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 2.6e-07 58.5 58 48.3
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 2.6e-07 58.5 78 41.0
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.4e-07 58.2 69 42.0
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 3.4e-07 58.2 69 42.0
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 3.4e-07 58.2 58 50.0
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 3.4e-07 58.2 62 43.5
THA.LOC109117280 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.4e-07 58.2 72 37.5
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 4.4e-07 57.8 58 48.3
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 4.4e-07 57.8 77 37.7
Rhsim13G0163600 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.4e-07 57.8 69 42.0
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-07 57.8 68 42.6
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.4e-07 57.8 72 37.5
MBI02_g02723_MAGBIO Magnolia biondii HOM05D024168 ORTHO05D013556 5.8e-07 57.4 62 45.2
Manes.12G054904 Manihot esculenta HOM05D000004 ORTHO05D000034 5.8e-07 57.4 63 47.6
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.8e-07 57.4 64 42.2
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 7.5e-07 57.0 64 45.3
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 7.5e-07 57.0 70 40.0
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 7.5e-07 57.0 57 49.1
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 7.5e-07 57.0 68 41.2
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 7.5e-07 57.0 61 45.9
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 7.5e-07 57.0 76 32.9
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 9.8e-07 56.6 69 40.6
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 9.8e-07 56.6 69 40.6
Haze_04663 Corylus avellana HOM05D014948 ORTHO05D000034 9.8e-07 56.6 77 39.0
MBI05_g38605_MAGBIO Magnolia biondii HOM05D000004 ORTHO05D013556 9.8e-07 56.6 62 43.5
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.8e-07 56.6 69 40.6
Rhsim11G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.8e-07 56.6 62 43.5
Hund03425 Selenicereus undatus HOM05D008371 ORTHO05D000224 9.8e-07 56.6 70 41.4
Hund30849 Selenicereus undatus HOM05D000004 ORTHO05D000224 9.8e-07 56.6 70 41.4
THA.LOC109116329 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.8e-07 56.6 72 34.7
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-06 56.2 68 44.1
QL03p042692 Quercus lobata HOM05D000004 ORTHO05D000002 1.3e-06 56.2 77 37.7
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 1.3e-06 56.2 68 41.2
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 1.7e-06 55.8 79 43.0
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 1.7e-06 55.8 58 48.3
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 1.7e-06 55.8 68 39.7
FvH4_3g28463 Fragaria vesca HOM05D011494 ORTHO05D000034 2.2e-06 55.5 69 37.7
Oeu003531.1 Olea europaea HOM05D009054 ORTHO05D000034 2.2e-06 55.5 54 50.0
Rhsim10G0111100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.2e-06 55.5 77 33.8
Rhsim10G0111300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.2e-06 55.5 77 33.8
Haze_01589 Corylus avellana HOM05D014948 ORTHO05D000034 2.9e-06 55.1 77 40.3
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 2.9e-06 55.1 58 48.3
ECA246G2936 Erigeron canadensis HOM05D000004 ORTHO05D000034 4.9e-06 54.3 87 35.6
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 6.4e-06 53.9 69 40.6
CSS0026441 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.4e-06 53.9 76 38.2
Haze_20305 Corylus avellana HOM05D014948 ORTHO05D000034 6.4e-06 53.9 66 39.4
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 6.4e-06 53.9 70 38.6
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 6.4e-06 53.9 66 37.9
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.4e-06 53.9 77 32.5
Rhsim07G0101500 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.4e-06 53.9 77 32.5
Rhsim08G0057000 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.4e-06 53.9 77 32.5
THA.LOC104800026 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 6.4e-06 53.9 69 36.2
THA.LOC109116233 Tarenaya hassleriana HOM05D000004 ORTHO05D000224 6.4e-06 53.9 81 38.3
TWI63G1549 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 6.4e-06 53.9 63 41.3
CSS0022166 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-06 53.5 69 37.7


User provided reference genes

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