Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.0e-96 354.8 181 100.0
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 4.2e-77 291.6 183 80.3
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.2e-76 290.0 191 79.1
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 5.1e-75 284.6 188 77.7
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 7.2e-69 264.2 187 74.3
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 6.5e-62 241.1 191 64.9
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 4.2e-61 238.4 189 65.1
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 3.0e-59 232.3 188 64.9
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 6.7e-59 231.1 192 62.0
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 6.7e-59 231.1 191 61.3
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 8.8e-59 230.7 179 67.0
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.2e-58 230.3 194 63.9
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 1.5e-58 229.9 184 65.2
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.5e-58 229.9 191 65.4
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.6e-58 229.2 197 63.5
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.6e-58 229.2 193 62.7
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.3e-57 226.9 187 63.1
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 2.2e-57 226.1 184 63.6
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 2.2e-57 226.1 198 61.1
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.8e-57 225.7 192 64.1
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 4.8e-57 224.9 188 62.8
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 4.8e-57 224.9 194 62.4
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 4.8e-57 224.9 182 62.6
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 6.3e-57 224.6 187 62.6
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 6.3e-57 224.6 193 61.1
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.3e-57 224.2 193 62.2
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.4e-56 222.6 182 62.1
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.4e-56 222.6 185 63.8
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.1e-56 222.2 192 61.5
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 4.1e-56 221.9 179 64.2
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 9.1e-56 220.7 182 61.0
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.2e-55 220.3 195 61.5
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.2e-55 220.3 180 64.4
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.2e-55 220.3 192 63.0
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.6e-55 219.9 185 63.2
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 2.0e-55 219.5 191 63.9
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 2.0e-55 219.5 194 58.8
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.5e-55 218.8 182 61.5
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 3.5e-55 218.8 193 59.1
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 5.9e-55 218.0 191 63.9
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 7.7e-55 217.6 194 58.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 7.7e-55 217.6 193 59.6
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.3e-54 216.9 179 60.3
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 2.2e-54 216.1 187 58.8
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.2e-54 216.1 190 59.5
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 2.9e-54 215.7 191 62.8
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 5.0e-54 214.9 185 62.2
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 5.0e-54 214.9 182 61.0
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 5.0e-54 214.9 185 60.0
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 6.5e-54 214.5 183 61.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 8.5e-54 214.2 186 59.1
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 1.1e-53 213.8 188 61.7
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.1e-53 213.8 178 62.4
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.1e-53 213.8 180 61.1
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.1e-53 213.8 180 61.1
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.1e-53 213.8 184 60.9
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.9e-53 213.0 186 59.1
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 1.9e-53 213.0 190 58.4
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 5.5e-53 211.5 129 74.4
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 7.2e-53 211.1 189 58.2
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.1e-52 209.5 190 56.3
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 6.1e-52 208.0 186 61.3
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 1.0e-51 207.2 224 52.2
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 6.8e-51 204.5 185 60.5
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 8.8e-51 204.1 191 56.5
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.2e-50 203.8 186 61.3
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 1.5e-50 203.4 191 57.6
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 5.7e-50 201.4 188 58.5
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 7.5e-50 201.1 189 56.1
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 9.8e-50 200.7 190 55.8
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 9.8e-50 200.7 188 56.9
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 9.8e-50 200.7 167 62.9
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 1.3e-49 200.3 189 55.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 2.2e-49 199.5 198 55.1
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 2.8e-49 199.1 188 55.3
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 4.8e-49 198.4 189 56.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.4e-48 196.8 131 72.5
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 1.8e-48 196.4 189 54.0
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 1.8e-48 196.4 189 54.0
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 3.1e-48 195.7 186 57.5
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 4.1e-48 195.3 187 53.5
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 4.1e-48 195.3 188 55.9
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 1.2e-47 193.7 187 56.7
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.6e-47 193.4 120 78.3
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 5.9e-47 191.4 190 54.7
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 7.7e-47 191.0 191 53.9
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.3e-46 190.3 185 53.5
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.3e-46 190.3 187 53.5
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.3e-46 190.3 180 54.4
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 2.3e-46 189.5 187 52.9
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 4.2e-45 185.3 185 57.3
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 6.1e-44 181.4 180 53.9
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 6.1e-44 181.4 180 53.9
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 6.1e-44 181.4 180 53.9
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.4e-43 180.3 186 51.6
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.0e-43 178.7 114 72.8
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 5.2e-43 178.3 185 53.0
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 3.4e-42 175.6 132 63.6
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 7.5e-42 174.5 125 62.4
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.3e-41 173.7 193 50.8
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 2.8e-41 172.6 111 73.0
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 9.2e-40 167.5 157 52.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.7e-39 166.0 164 54.3
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 2.7e-39 166.0 194 46.9
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 4.5e-39 165.2 161 54.7
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 3.4e-34 149.1 132 59.1
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 9.8e-34 147.5 182 47.3
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.2e-31 140.6 96 70.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.5e-29 132.9 81 74.1
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 7.3e-29 131.3 174 44.8
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 9.5e-29 131.0 98 57.1
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 9.5e-29 131.0 191 39.3
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.2e-28 130.6 190 40.0
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 2.1e-28 129.8 128 57.8
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.4e-27 127.1 92 60.9
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.1e-27 125.9 113 61.1
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.6e-20 103.6 66 72.7
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 8.1e-20 101.3 161 35.4
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 8.3e-17 91.3 176 33.5
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 3.2e-16 89.4 101 54.5
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 4.1e-16 89.0 95 53.7
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.0e-14 82.8 86 54.7
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 5.1e-14 82.0 157 32.5
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 3.3e-13 79.3 115 35.7
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 1.4e-08 63.9 39 74.4
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 1.6e-07 60.5 40 72.5


User provided reference genes

Program Settings