Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.7e-219 765.0 382 100.0
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.8e-158 560.8 301 96.7
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-145 520.4 302 90.4
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 3.8e-144 515.4 296 90.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 2.5e-143 512.7 302 87.7
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 5.5e-143 511.5 296 89.2
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 5.5e-143 511.5 302 87.4
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.1e-142 509.6 302 87.7
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 3.5e-142 508.8 302 85.8
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 6.0e-142 508.1 302 86.4
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 2.3e-141 506.1 329 82.1
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 3.9e-141 505.4 302 86.1
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 8.7e-141 504.2 302 86.4
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 1.1e-140 503.8 302 85.4
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 1.9e-140 503.1 302 86.4
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.9e-140 503.1 295 87.8
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 3.3e-140 502.3 302 85.1
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 4.3e-140 501.9 302 85.1
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 7.4e-140 501.1 302 86.1
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 9.6e-140 500.7 303 85.5
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 1.3e-139 500.4 298 86.6
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 6.2e-139 498.0 298 85.6
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 8.2e-139 497.7 300 86.3
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 1.1e-138 497.3 296 85.8
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 1.8e-138 496.5 302 85.1
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 3.1e-138 495.7 296 85.5
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 3.1e-138 495.7 296 85.5
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 3.1e-138 495.7 303 84.8
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 5.3e-138 495.0 295 86.1
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 9.0e-138 494.2 301 85.4
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.5e-137 493.4 299 84.6
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 2.0e-137 493.0 302 84.4
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 3.4e-137 492.3 301 84.1
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 4.5e-137 491.9 299 84.9
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 4.5e-137 491.9 296 85.1
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 7.6e-137 491.1 296 84.8
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 2.2e-136 489.6 296 84.5
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.9e-136 489.2 302 83.1
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.8e-136 488.8 302 83.8
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 6.5e-136 488.0 302 82.8
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.4e-136 487.6 305 84.6
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 8.4e-136 487.6 305 84.6
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 1.4e-135 486.9 296 84.8
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 1.4e-135 486.9 300 83.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.4e-135 486.9 296 84.1
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 2.5e-135 486.1 297 83.5
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.2e-135 485.7 302 82.5
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 4.2e-135 485.3 302 83.8
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 5.5e-135 485.0 296 83.8
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 7.1e-135 484.6 331 77.3
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 9.3e-135 484.2 299 83.6
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 9.3e-135 484.2 296 83.4
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 1.2e-134 483.8 302 83.4
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.6e-134 483.4 372 70.7
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.6e-134 483.4 296 83.4
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 6.1e-134 481.5 299 82.9
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 7.9e-134 481.1 302 83.1
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.3e-133 480.3 296 83.1
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.3e-133 480.3 296 83.1
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 1.3e-133 480.3 299 82.9
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 1.8e-133 479.9 331 76.4
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 3.0e-133 479.2 296 82.8
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 3.0e-133 479.2 298 82.9
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 3.9e-133 478.8 302 82.1
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 3.9e-133 478.8 292 82.2
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 2.5e-132 476.1 302 82.1
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 2.5e-132 476.1 302 82.1
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 3.3e-132 475.7 298 82.6
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 9.7e-132 474.2 296 82.8
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 9.7e-132 474.2 336 75.3
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-130 470.7 308 80.5
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 1.1e-130 470.7 296 81.4
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.1e-130 469.2 292 80.5
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 4.1e-130 468.8 296 81.4
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.3e-130 468.4 292 80.5
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 9.0e-130 467.6 343 74.6
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 2.0e-129 466.5 356 72.5
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 5.0e-128 461.8 294 82.7
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 6.5e-128 461.5 302 80.1
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 2.5e-127 459.5 301 78.4
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 7.2e-127 458.0 301 78.1
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 9.4e-127 457.6 279 81.7
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 1.2e-126 457.2 299 77.3
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.6e-126 456.8 257 88.7
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 1.6e-126 456.8 270 87.4
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.1e-126 456.4 299 77.3
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 3.6e-126 455.7 299 76.9
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 4.6e-126 455.3 301 76.4
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 6.1e-126 454.9 299 76.9
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 6.1e-126 454.9 299 76.9
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 6.1e-126 454.9 299 76.9
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 6.1e-126 454.9 299 76.9
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 6.1e-126 454.9 299 76.9
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 1.4e-125 453.8 299 76.6
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 3.0e-125 452.6 299 76.3
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.5e-124 449.5 425 60.5
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 3.7e-123 445.7 298 76.5
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 3.1e-122 442.6 299 75.3
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 4.1e-122 442.2 308 76.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 6.9e-122 441.4 284 78.5
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.2e-121 440.7 331 70.4
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 4.2e-119 432.2 302 77.2
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 5.5e-119 431.8 299 75.6
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 7.2e-119 431.4 308 72.4
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.1e-118 429.9 300 74.7
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.0e-117 426.0 300 72.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.1e-116 424.1 296 78.7
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.5e-116 423.7 300 74.0
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 9.1e-114 414.5 300 72.0
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 2.9e-112 409.5 294 74.8
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.2e-111 406.0 275 78.9
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 5.5e-111 405.2 297 69.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 5.2e-101 372.1 293 70.6
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 2.9e-96 356.3 274 67.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 1.1e-95 354.4 223 80.7
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 6.1e-94 348.6 305 58.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 8.0e-94 348.2 203 90.1
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.2e-92 344.4 240 69.2
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 6.3e-91 338.6 305 59.7
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.8e-90 337.0 293 59.7
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 1.9e-87 327.0 233 74.2
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 3.6e-86 322.8 236 68.2
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.2e-76 291.2 165 87.3
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 6.6e-72 275.4 306 57.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.3e-71 273.1 287 55.1
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 8.1e-70 268.5 165 80.6
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 3.4e-68 263.1 167 83.2
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 3.5e-65 253.1 308 44.5
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.6e-62 244.2 135 87.4
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 5.2e-61 239.2 190 71.6
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.3e-59 234.6 190 70.0
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 3.5e-57 226.5 129 86.8
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 3.0e-56 223.4 137 86.1
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 8.1e-54 215.3 190 66.8
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 4.2e-50 203.0 281 45.9
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.5e-44 184.5 103 85.4
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 7.6e-44 182.2 249 50.6
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.3e-40 171.4 162 55.6
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.5e-39 167.9 150 57.3
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 3.1e-37 160.2 92 87.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 4.5e-36 156.4 103 75.7
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.3e-35 154.8 87 83.9
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.5e-31 140.6 91 82.4
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.5e-31 140.6 77 89.6
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 4.8e-30 136.3 69 89.9
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.2e-28 131.7 75 85.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 7.6e-28 129.0 80 81.2
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-26 125.2 72 81.9
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 6.7e-24 115.9 72 81.9
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 9.6e-23 112.1 67 83.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 3.7e-22 110.2 69 78.3
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 2.6e-20 104.0 182 43.4
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 7.6e-20 102.4 65 80.0
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 1.3e-11 75.1 63 66.7
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 8.8e-08 62.4 85 48.2
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.5e-07 60.8 76 46.1
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 2.5e-07 60.8 33 84.8


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