Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.3e-192 674.9 340 100.0
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 3.1e-190 668.3 340 99.1
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 6.5e-164 580.9 340 87.6
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 2.9e-156 555.4 339 82.9
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 1.6e-149 533.1 346 80.6
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 4.4e-144 515.0 325 79.1
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 4.4e-144 515.0 337 78.6
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 7.5e-144 514.2 338 77.5
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 3.7e-143 511.9 341 75.4
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.4e-142 509.2 336 76.8
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 2.4e-142 509.2 336 76.8
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 2.4e-142 509.2 323 81.1
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 5.4e-142 508.1 336 76.5
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 3.5e-141 505.4 330 77.9
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 5.9e-141 504.6 335 76.1
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 7.8e-141 504.2 328 78.0
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 1.0e-140 503.8 328 76.8
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.9e-140 501.9 336 76.2
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 5.6e-139 498.0 340 73.2
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 7.3e-139 497.7 329 77.5
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.2e-138 496.9 336 75.6
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 4.7e-138 495.0 340 75.6
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 6.1e-138 494.6 323 78.0
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 8.9e-137 490.7 325 77.5
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 2.0e-136 489.6 326 74.8
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 2.0e-136 489.6 321 76.0
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 2.6e-136 489.2 340 75.3
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 4.4e-136 488.4 342 73.4
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 7.5e-136 487.6 321 75.7
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 9.8e-136 487.3 327 76.8
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.7e-135 486.5 328 76.8
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 2.9e-135 485.7 330 73.6
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 2.9e-135 485.7 320 76.6
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 3.7e-135 485.3 323 74.0
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 8.3e-135 484.2 334 73.1
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 1.1e-134 483.8 341 73.0
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 1.9e-134 483.0 340 70.9
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 3.2e-134 482.3 336 74.4
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.2e-133 480.3 323 73.4
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 1.2e-133 480.3 324 74.1
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 1.6e-133 479.9 323 73.7
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.3e-132 476.9 339 71.7
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 1.3e-132 476.9 330 73.3
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 1.7e-132 476.5 334 74.9
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 2.3e-132 476.1 325 72.6
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 3.9e-132 475.3 330 73.6
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 8.6e-132 474.2 338 71.0
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 8.6e-132 474.2 340 72.1
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 8.6e-132 474.2 335 74.3
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 3.3e-131 472.2 321 74.5
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 4.3e-131 471.9 323 72.1
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 1.6e-130 469.9 311 75.6
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 1.6e-130 469.9 323 71.8
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 1.6e-130 469.9 332 71.4
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 3.6e-130 468.8 323 74.3
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 1.8e-129 466.5 323 73.1
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 3.1e-129 465.7 340 70.6
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 5.2e-129 464.9 320 71.9
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 5.2e-129 464.9 337 70.6
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 6.8e-129 464.5 323 71.2
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 8.9e-129 464.2 337 71.8
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 8.9e-129 464.2 338 70.7
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 2.6e-128 462.6 319 73.0
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 5.8e-128 461.5 323 71.2
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 5.8e-128 461.5 323 70.9
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 5.8e-128 461.5 328 72.0
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 7.5e-128 461.1 325 71.4
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.7e-127 459.9 432 60.0
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 2.9e-127 459.1 323 70.6
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.7e-127 458.8 337 69.1
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 3.7e-127 458.8 323 72.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 4.9e-127 458.4 318 72.3
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 1.1e-126 457.2 313 73.2
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 9.2e-126 454.1 340 69.7
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 9.5e-123 444.1 321 69.8
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 4.7e-122 441.8 327 69.4
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 4.7e-122 441.8 327 71.3
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 3.7e-119 432.2 317 69.7
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.1e-118 430.6 280 76.8
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.6e-117 426.8 340 67.4
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.0e-116 422.5 323 67.5
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 1.9e-115 419.9 280 74.3
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 5.2e-113 411.8 316 67.4
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 2.4e-110 402.9 271 75.3
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 2.7e-109 399.4 337 62.0
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 2.3e-108 396.4 337 63.2
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 6.6e-108 394.8 389 58.4
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 5.3e-105 385.2 323 64.7
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 6.0e-101 371.7 369 55.8
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 5.1e-100 368.6 353 58.9
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.9e-99 366.7 318 62.6
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 7.9e-93 344.7 329 55.6
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 1.2e-88 330.9 330 54.2
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 2.8e-82 309.7 327 51.7
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 4.8e-82 308.9 227 71.4
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 4.8e-82 308.9 205 75.6
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 7.9e-69 265.0 278 55.0
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.2e-66 256.9 294 47.6
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 3.3e-59 233.0 366 40.2
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 6.7e-52 208.8 301 39.9
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 1.2e-48 198.0 167 64.7
CDE02G3282 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 3.8e-47 193.0 191 57.1
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 9.8e-43 178.3 182 52.2
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 2.8e-42 176.8 119 65.5
CDE02G3739 Ceratophyllum demersum HOM05D007053 ORTHO05D008922 1.0e-39 168.3 106 75.5
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 1.7e-39 167.5 104 80.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 1.5e-19 101.3 230 33.9
Lsat_1_v5_gn_5_96721 Lactuca sativa HOM05D007053 ORTHO05D008922 5.2e-12 76.3 51 68.6
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 4.4e-11 73.2 49 67.3
SEGI_13989 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 6.4e-10 69.3 79 54.4
Os01g0764600 Oryza sativa ssp. japonica HOM05D007053 ORTHO05D008922 2.7e-08 63.9 84 46.4
AL2G14220 Arabidopsis lyrata HOM05D011085 ORTHO05D031413 1.9e-06 57.8 93 38.7


User provided reference genes

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