Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 2.7e-132 475.3 234 100.0
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 4.0e-128 461.5 232 98.3
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 2.4e-117 425.6 232 90.9
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 1.0e-115 420.2 232 90.5
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 1.3e-115 419.9 232 90.5
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 1.7e-115 419.5 232 90.1
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 5.0e-115 417.9 232 89.2
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 1.1e-114 416.8 232 87.5
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 2.5e-114 415.6 232 88.4
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 1.6e-113 412.9 232 89.7
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 1.6e-113 412.9 232 87.9
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 3.6e-113 411.8 232 87.5
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 3.6e-113 411.8 232 87.9
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 8.0e-113 410.6 232 85.3
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 1.8e-112 409.5 232 87.5
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 4.0e-112 408.3 232 86.6
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 4.0e-112 408.3 232 86.6
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 5.2e-112 407.9 232 87.9
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 1.2e-111 406.8 232 85.3
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.2e-111 406.8 232 86.6
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 3.4e-111 405.2 232 86.2
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 3.4e-111 405.2 232 86.2
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 5.8e-111 404.4 232 86.2
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 1.3e-110 403.3 232 85.8
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 1.3e-110 403.3 232 85.8
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 2.2e-110 402.5 232 85.8
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 2.9e-110 402.1 232 84.9
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 4.9e-110 401.4 232 85.3
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 6.4e-110 401.0 232 85.8
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 6.4e-110 401.0 232 84.9
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 8.3e-110 400.6 232 86.2
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 1.1e-109 400.2 232 84.9
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 4.1e-109 398.3 233 87.1
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 7.0e-109 397.5 232 84.1
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 7.0e-109 397.5 232 83.6
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 9.2e-109 397.1 232 83.6
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 1.6e-108 396.4 232 83.2
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 2.0e-108 396.0 232 83.6
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 2.0e-108 396.0 232 83.6
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 2.7e-108 395.6 232 82.3
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 2.7e-108 395.6 232 83.6
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 6.0e-108 394.4 232 84.1
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 6.0e-108 394.4 232 84.5
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 7.8e-108 394.0 232 85.3
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 1.0e-107 393.7 246 80.1
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.0e-107 393.7 232 83.2
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 3.0e-107 392.1 232 81.0
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 3.0e-107 392.1 232 83.6
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 3.0e-107 392.1 232 84.9
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 3.9e-107 391.7 232 83.6
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 5.0e-107 391.3 232 83.6
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 6.6e-107 391.0 232 84.1
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 6.6e-107 391.0 232 84.1
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 1.9e-106 389.4 232 81.5
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 4.3e-106 388.3 232 82.8
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 5.6e-106 387.9 232 81.9
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 7.3e-106 387.5 232 81.9
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 1.6e-105 386.3 230 82.2
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 1.6e-105 386.3 232 81.0
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 1.6e-105 386.3 232 79.7
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 1.6e-105 386.3 232 81.0
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 2.1e-105 386.0 232 83.2
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 2.8e-105 385.6 232 82.3
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 8.1e-105 384.0 232 83.2
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 3.1e-104 382.1 232 79.7
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 4.0e-104 381.7 232 79.7
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 8.9e-104 380.6 232 81.9
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 8.9e-104 380.6 232 82.8
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 1.3e-102 376.7 220 84.5
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 1.7e-102 376.3 232 80.6
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.7e-100 369.0 232 80.2
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.7e-100 369.0 232 80.6
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 1.3e-99 366.7 232 80.2
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 2.3e-99 365.9 230 80.9
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 1.6e-97 359.8 232 78.4
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 2.8e-97 359.0 231 76.2
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 4.7e-97 358.2 232 78.0
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 6.2e-97 357.8 234 77.4
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 1.1e-96 357.1 232 77.2
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 1.1e-96 357.1 233 78.1
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 1.4e-96 356.7 232 77.6
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 1.8e-96 356.3 232 77.2
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 1.8e-96 356.3 232 77.2
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 1.8e-96 356.3 232 77.2
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 1.8e-96 356.3 232 77.2
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 1.8e-96 356.3 232 77.2
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 3.1e-96 355.5 232 78.0
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 3.1e-96 355.5 232 76.3
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 3.4e-95 352.1 232 76.7
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 1.6e-92 343.2 232 75.4
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 4.6e-92 341.7 232 73.7
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 7.8e-92 340.9 232 75.0
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 2.3e-91 339.3 193 89.1
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 7.3e-90 334.3 232 74.1
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 1.4e-88 330.1 244 66.4
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 1.8e-88 329.7 232 69.0
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 2.1e-81 306.2 241 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 2.8e-81 305.8 238 63.4
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 2.0e-79 299.7 232 63.4
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 3.8e-78 295.4 219 68.9
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 3.2e-77 292.4 176 81.8
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 1.4e-69 266.9 234 60.7
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 9.0e-56 221.1 232 53.4
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 3.8e-54 215.7 236 47.9
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 6.3e-49 198.4 250 42.8
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 8.2e-49 198.0 246 42.7
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 4.1e-40 169.1 102 79.4
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.4e-08 64.3 188 31.4
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.4e-08 64.3 188 31.4
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 5.4e-08 62.4 83 49.4
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 1.0e-06 58.2 26 96.2


User provided reference genes

Program Settings