Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030099 Camellia sinensis var. sinensis HOM05D000188 ORTHO05D007139 1.5e-92 342.8 166 100.0
Actinidia38813 Actinidia chinensis HOM05D000188 ORTHO05D007139 2.5e-60 235.7 128 83.6
Dinv20330 Davidia involucrata HOM05D000188 ORTHO05D007139 4.7e-59 231.5 128 83.6
vmacro18738 Vaccinium macrocarpon HOM05D000188 ORTHO05D007139 4.7e-59 231.5 128 83.6
Rhsim08G0251000 Rhododendron simsii HOM05D000188 ORTHO05D007139 1.5e-57 226.5 128 82.0
TAR626G1930 Trochodendron aralioides HOM05D000188 ORTHO05D007139 1.9e-55 219.5 128 78.9
Oeu049627.2 Olea europaea HOM05D000188 ORTHO05D007139 2.7e-54 215.7 128 77.3
Nn8g41021 Nelumbo nucifera HOM05D000188 ORTHO05D007139 6.0e-54 214.5 128 77.3
Manes.06G179400 Manihot esculenta HOM05D000188 ORTHO05D007139 1.7e-53 213.0 128 75.8
HanXRQChr09g0277431 Helianthus annuus HOM05D000188 ORTHO05D007139 6.6e-53 211.1 142 69.0
TWI75G0981 Tripterygium wilfordii HOM05D000188 ORTHO05D007139 8.7e-53 210.7 128 72.7
Gohir.A06G116602 Gossypium hirsutum HOM05D000188 ORTHO05D007139 1.9e-52 209.5 128 73.4
Gorai.010G141600 Gossypium raimondii HOM05D000188 ORTHO05D007139 1.9e-52 209.5 128 73.4
DCAR_007673 Daucus carota HOM05D000188 ORTHO05D007139 3.3e-52 208.8 128 73.4
Gohir.D06G121300 Gossypium hirsutum HOM05D000188 ORTHO05D007139 5.6e-52 208.0 128 73.4
Migut.I01205 Erythranthe guttata HOM05D000188 ORTHO05D007139 7.3e-52 207.6 128 74.2
Atru.chr1.2637 Acer truncatum HOM05D000188 ORTHO05D007139 1.3e-51 206.8 128 72.7
FvH4_6g36870 Fragaria vesca HOM05D000188 ORTHO05D007139 1.3e-51 206.8 128 73.4
FAN05G3735 Fragaria x ananassa HOM05D000188 ORTHO05D007139 1.3e-51 206.8 128 73.4
Nitab4.5_0000499g0150 Nicotiana tabacum HOM05D000188 ORTHO05D007139 1.3e-51 206.8 125 76.8
MBI13_g31555_MAGBIO Magnolia biondii HOM05D000188 ORTHO05D007139 1.6e-51 206.5 128 72.7
Thecc.06G055500 Theobroma cacao HOM05D000188 ORTHO05D007139 2.1e-51 206.1 128 72.7
MSTRG.10871 Avicennia marina HOM05D000188 ORTHO05D007139 3.6e-51 205.3 128 73.4
MD17G1161500 Malus domestica HOM05D000188 ORTHO05D007139 3.6e-51 205.3 128 72.7
Nitab4.5_0005664g0040 Nicotiana tabacum HOM05D000188 ORTHO05D007139 3.6e-51 205.3 125 76.0
Lsat_1_v5_gn_4_106301 Lactuca sativa HOM05D000188 ORTHO05D007139 6.2e-51 204.5 128 72.7
Carub.0001s1653 Capsella rubella HOM05D000188 ORTHO05D007139 8.1e-51 204.1 128 71.9
QL05p088801 Quercus lobata HOM05D000188 ORTHO05D007139 8.1e-51 204.1 128 73.4
Aqoxy7G02708 Aquilegia oxysepala HOM05D000188 ORTHO05D007139 1.4e-50 203.4 128 74.2
Duzib235G1191 Durio zibethinus HOM05D000188 ORTHO05D007139 1.8e-50 203.0 128 70.3
RcHm_v2.0_Chr2g0149261 Rosa chinensis HOM05D000188 ORTHO05D007139 1.8e-50 203.0 128 71.9
MELO3C024274.2 Cucumis melo HOM05D000188 ORTHO05D007139 2.4e-50 202.6 139 67.6
CANSAT01G3266 Cannabis sativa HOM05D000188 ORTHO05D007139 3.1e-50 202.2 128 73.4
Aa31LG7G1250 Aethionema arabicum HOM05D000188 ORTHO05D007139 4.0e-50 201.8 128 70.3
FAN14G3865 Fragaria x ananassa HOM05D000188 ORTHO05D007139 4.0e-50 201.8 124 74.2
Sp1g14940 Schrenkiella parvula HOM05D000188 ORTHO05D007139 4.0e-50 201.8 128 70.3
AL1G28970 Arabidopsis lyrata HOM05D000188 ORTHO05D007139 5.3e-50 201.4 128 71.1
CsaV3_7G033630 Cucumis sativus L. HOM05D000188 ORTHO05D007139 5.3e-50 201.4 139 66.9
GSVIVG01029557001 Vitis vinifera HOM05D000188 ORTHO05D007139 5.3e-50 201.4 128 74.2
AT1G16800 Arabidopsis thaliana HOM05D000188 ORTHO05D007139 6.9e-50 201.1 128 71.1
CiPaw.01G208400 Carya illinoinensis HOM05D000188 ORTHO05D007139 6.9e-50 201.1 128 71.9
Ca_00990_v3 Cicer arietinum L. HOM05D000188 ORTHO05D007139 1.5e-49 199.9 128 68.8
Sc12g0011220 Simmondsia chinensis HOM05D000188 ORTHO05D007139 4.4e-49 198.4 128 70.3
Sc12g0011320 Simmondsia chinensis HOM05D000188 ORTHO05D007139 4.4e-49 198.4 128 70.3
ClCG09G001690 Citrullus lanatus HOM05D000188 ORTHO05D007139 9.9e-49 197.2 141 66.0
SGA_v2.0_scaffold71G23977 Striga asiatica HOM05D000188 ORTHO05D007139 1.3e-48 196.8 128 72.7
TPR.G31778 Trifolium pratense HOM05D000188 ORTHO05D007139 1.3e-48 196.8 128 68.8
Eucgr.F04034 Eucalyptus grandis HOM05D000188 ORTHO05D007139 2.9e-48 195.7 128 71.9
Sopen03g041740 Solanum pennellii HOM05D000188 ORTHO05D007139 3.8e-48 195.3 128 70.3
Thhalv10006526m.g Eutrema salsugineum HOM05D000188 ORTHO05D007139 4.9e-48 194.9 128 69.5
Sed0003713 Sechium edule HOM05D000188 ORTHO05D007139 8.4e-48 194.1 139 65.5
Cfa003435 Carpinus fangiana HOM05D000188 ORTHO05D007139 1.1e-47 193.7 128 71.1
Potri.010G253700 Populus trichocarpa HOM05D000188 ORTHO05D007139 1.1e-47 193.7 128 68.0
Solyc03g124010.3 Solanum lycopersicum HOM05D000188 ORTHO05D007139 1.4e-47 193.4 128 68.8
Sabra10G0197300 Salix brachista HOM05D000188 ORTHO05D007139 4.2e-47 191.8 128 67.2
PSO063G4027 Papaver somniferum HOM05D000188 ORTHO05D007139 5.4e-47 191.4 128 68.8
Haze_16190 Corylus avellana HOM05D000188 ORTHO05D007139 3.5e-46 188.7 126 70.6
A09p60750 Brassica napus HOM05D000188 ORTHO05D007139 4.6e-46 188.3 128 67.2
Medtr2g105760 Medicago truncatula HOM05D000188 ORTHO05D007139 4.6e-46 188.3 128 64.8
Phvul.005G185500 Phaseolus vulgaris HOM05D000188 ORTHO05D007139 4.6e-46 188.3 128 66.4
arahy.Tifrunner.gnm1.ann1.7AF0V0 Arachis hypogaea HOM05D000188 ORTHO05D007139 7.8e-46 187.6 128 64.1
arahy.Tifrunner.gnm1.ann1.E73V3Q Arachis hypogaea HOM05D000188 ORTHO05D007139 7.8e-46 187.6 128 64.1
arahy.Tifrunner.gnm1.ann1.X4F6IJ Arachis hypogaea HOM05D000188 ORTHO05D007139 7.8e-46 187.6 128 64.1
C08p44330 Brassica napus HOM05D000188 ORTHO05D007139 1.0e-45 187.2 128 66.4
BolC8t51976H Brassica oleracea HOM05D000188 ORTHO05D007139 1.0e-45 187.2 128 66.4
BraA09t41448Z Brassica rapa HOM05D000188 ORTHO05D007139 1.3e-45 186.8 128 67.2
Lalb_Chr24g0392731 Lupinus albus HOM05D000188 ORTHO05D007139 1.3e-45 186.8 128 65.6
SHI31124 Sapria himalayana HOM05D000188 ORTHO05D007139 1.3e-45 186.8 128 66.4
PGR102G0095 Punica granatum HOM05D000188 ORTHO05D007139 2.3e-45 186.0 128 65.6
Hund18588 Selenicereus undatus HOM05D000188 ORTHO05D007139 2.3e-45 186.0 128 66.4
Cc04_g00080 Coffea canephora HOM05D000188 ORTHO05D007139 5.1e-45 184.9 128 65.6
THA.LOC104812332 Tarenaya hassleriana HOM05D000188 ORTHO05D007139 1.1e-44 183.7 128 64.1
Ciclev10030470m.g Citrus clementina HOM05D000188 ORTHO05D007139 1.5e-44 183.3 128 64.1
Ah.08g217820 Amaranthus hybridus HOM05D000188 ORTHO05D007139 1.9e-44 183.0 128 63.3
PSO170G2611 Papaver somniferum HOM05D000188 ORTHO05D007139 1.9e-44 183.0 128 67.2
BcaC07g41381 Brassica carinata HOM05D000188 ORTHO05D007139 2.5e-44 182.6 125 67.2
AUR62001329 Chenopodium quinoa HOM05D000188 ORTHO05D007139 2.5e-44 182.6 144 58.3
AUR62025712 Chenopodium quinoa HOM05D000188 ORTHO05D007139 7.3e-44 181.0 144 57.6
Lj5C21G6 Lonicera japonica HOM05D000188 ORTHO05D007139 2.1e-43 179.5 104 81.7
Peaxi162Scf00038g02644 Petunia axillaris HOM05D000188 ORTHO05D007139 8.1e-43 177.6 128 62.5
ATR0626G062 Amborella trichopoda HOM05D000188 ORTHO05D007139 2.4e-42 176.0 128 61.7
VMungo1080G1266 Vigna mungo HOM05D000188 ORTHO05D007139 2.4e-42 176.0 141 61.0
EL10Ac7g18133 Beta vulgaris HOM05D000188 ORTHO05D007139 5.3e-42 174.9 133 60.9
Psat5g305200 Pisum sativum HOM05D000188 ORTHO05D007139 5.3e-42 174.9 128 59.4
unitig_61.g26086 Utricularia gibba HOM05D000566 ORTHO05D000686 4.5e-41 171.8 139 59.7
ECA232G2101 Erigeron canadensis HOM05D000188 ORTHO05D007139 4.9e-40 168.3 136 59.6
HPP92_017102 Vanilla planifolia HOM05D000188 ORTHO05D007139 1.4e-39 166.8 128 62.5
Cpa.g.sc176.12 Carica papaya HOM05D000188 ORTHO05D007139 3.0e-37 159.1 104 72.1
SEGI_28194 Sequoiadendron giganteum HOM05D000188 ORTHO05D007139 1.3e-35 153.7 128 55.5
Zm00001eb317140 Zea mays HOM05D000188 ORTHO05D007139 3.1e-34 149.1 128 50.8
Mapoly0134s0010 Marchantia polymorpha HOM05D000188 ORTHO05D007139 8.2e-27 124.4 128 42.2
Hma1.2p1_0558F.1_g178540 Hydrangea macrophylla HOM05D000188 ORTHO05D007139 6.5e-24 114.8 80 68.8
Pp3c10_25870 Physcomitrium patens HOM05D000188 ORTHO05D007139 1.1e-23 114.0 128 44.5
AagrBONN_evm.TU.Sc2ySwM_117.435 Anthoceros agrestis HOM05D000188 ORTHO05D007139 5.5e-23 111.7 128 43.0
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 1.3e-19 100.5 97 46.4
FAN02G2966 Fragaria x ananassa HOM05D000188 ORTHO05D007139 1.9e-15 86.7 63 66.7
COL.COLO4_31140 Corchorus olitorius HOM05D000188 ORTHO05D007139 1.1e-10 70.9 53 62.3
SMO347G0279 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 4.1e-10 68.9 104 36.5


User provided reference genes

Program Settings