Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 4.7e-156 554.7 321 100.0
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 3.2e-88 329.3 277 64.3
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.7e-87 326.2 280 63.2
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.2e-74 284.3 275 55.3
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 5.4e-67 258.8 293 50.9
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 9.1e-67 258.1 262 55.3
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 5.5e-64 248.8 257 52.9
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.2e-61 241.1 262 50.8
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 2.6e-61 240.0 272 49.3
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 3.4e-61 239.6 267 50.2
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 1.7e-60 237.3 280 49.3
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 5.4e-59 232.3 286 47.2
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 7.0e-59 231.9 272 47.4
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.3e-57 227.6 272 47.4
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 6.6e-57 225.3 276 49.6
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 8.6e-57 224.9 272 47.1
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 8.6e-57 224.9 275 46.9
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.5e-56 223.4 266 47.0
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 7.3e-56 221.9 274 44.9
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.2e-55 221.1 262 45.8
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 4.7e-55 219.2 282 47.9
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.0e-54 218.0 280 47.5
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 1.0e-54 218.0 284 47.9
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.4e-54 217.6 267 46.4
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.4e-54 217.6 266 44.7
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 2.3e-54 216.9 283 48.1
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.5e-53 214.2 280 45.7
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 2.0e-53 213.8 271 46.9
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 2.6e-53 213.4 271 47.6
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 2.6e-53 213.4 271 48.0
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 3.4e-53 213.0 283 44.9
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.3e-52 211.1 287 44.9
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.3e-52 211.1 281 44.5
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 2.2e-52 210.3 276 44.6
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.1e-51 208.0 261 44.4
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.4e-51 207.6 249 47.0
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.9e-51 207.2 276 46.4
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 2.4e-51 206.8 273 45.8
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 3.2e-51 206.5 262 48.5
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 3.2e-51 206.5 262 48.5
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 9.2e-51 204.9 260 45.4
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.2e-50 204.5 278 42.4
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.2e-50 204.5 322 40.7
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.0e-50 203.8 280 45.4
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 3.5e-50 203.0 200 52.5
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.7e-49 200.7 277 45.5
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 6.6e-49 198.7 252 44.4
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 8.6e-49 198.4 165 64.8
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.5e-48 196.8 253 46.6
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 1.6e-47 194.1 283 42.0
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 2.1e-47 193.7 275 44.7
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 3.6e-47 193.0 259 43.2
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 3.6e-47 193.0 259 44.0
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 4.0e-46 189.5 244 45.9
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 6.8e-46 188.7 275 44.4
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 9.8e-45 184.9 251 40.2
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 8.3e-44 181.8 259 41.7
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 5.4e-43 179.1 257 39.7
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 7.1e-43 178.7 274 40.9
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 1.2e-42 177.9 251 41.4
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 1.0e-41 174.9 256 42.2
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.3e-41 174.5 260 42.7
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.7e-41 174.1 282 42.6
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.7e-41 174.1 263 38.4
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.3e-41 173.7 260 42.7
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 3.0e-41 173.3 160 58.8
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 1.5e-40 171.0 232 43.5
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 7.3e-40 168.7 251 43.8
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.8e-39 166.8 276 39.1
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 3.6e-39 166.4 193 45.1
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 4.0e-38 162.9 256 42.6
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 5.2e-38 162.5 248 41.9
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 5.2e-38 162.5 196 48.5
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 6.8e-38 162.2 259 41.3
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 8.9e-38 161.8 252 41.7
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.2e-37 161.4 204 43.1
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 9.9e-37 158.3 279 39.1
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 2.2e-36 157.1 276 40.9
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 3.7e-36 156.4 256 40.6
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 4.9e-36 156.0 259 40.2
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 6.4e-36 155.6 268 40.7
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 5.4e-35 152.5 276 40.9
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 5.4e-35 152.5 265 40.4
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 5.4e-35 152.5 265 40.4
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 5.4e-35 152.5 257 39.3
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 2.1e-34 150.6 259 40.2
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 1.0e-33 148.3 196 44.4
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.0e-33 148.3 159 50.3
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.7e-33 147.5 304 33.9
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.2e-29 134.8 108 58.3
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 4.0e-22 109.8 192 38.0
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 3.4e-21 106.7 279 30.8
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.9e-20 102.8 161 39.8
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 7.3e-16 89.0 102 49.0
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 2.1e-15 87.4 265 32.5
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 3.2e-11 73.6 130 35.4
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 2.3e-09 67.4 116 34.5
QL05p010901 Quercus lobata HOM05D007444 ORTHO05D009359 3.0e-09 67.0 51 66.7
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 4.3e-08 63.2 78 44.9
Actinidia39108 Actinidia chinensis HOM05D007444 ORTHO05D009359 4.0e-06 56.6 128 30.5


User provided reference genes

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