Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.8e-77 292.4 207 100.0
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.0e-39 167.5 196 75.5
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 5.8e-38 161.8 186 67.7
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.2e-37 159.8 189 73.5
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.0e-35 151.8 195 68.7
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 7.8e-35 151.4 189 72.0
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 5.0e-34 148.7 190 73.7
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 1.9e-33 146.7 195 56.9
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 1.6e-32 143.7 189 73.5
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.3e-31 139.8 190 62.6
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 2.0e-30 136.7 193 66.3
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 4.4e-30 135.6 196 69.9
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.3e-29 134.0 190 66.8
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 1.3e-29 134.0 196 67.3
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 8.3e-29 131.3 198 67.7
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.1e-28 131.0 174 71.8
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 1.9e-28 130.2 191 60.7
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.2e-28 129.4 196 67.3
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 3.2e-28 129.4 187 60.4
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 9.2e-28 127.9 192 66.7
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 1.0e-26 124.4 189 63.0
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 1.0e-26 124.4 188 61.7
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.0e-26 122.9 198 63.6
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 3.0e-26 122.9 193 60.1
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 1.5e-25 120.6 182 69.2
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.9e-25 120.2 146 74.0
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 4.3e-25 119.0 189 64.6
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 7.3e-25 118.2 146 68.5
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 7.3e-25 118.2 193 60.1
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 4.7e-24 115.5 196 64.3
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.2e-24 115.2 187 64.7
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 8.1e-24 114.8 187 59.9
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.4e-23 114.0 147 71.4
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 2.3e-23 113.2 115 68.7
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.3e-23 113.2 188 55.3
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.3e-23 113.2 210 60.5
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 4.0e-23 112.5 193 61.7
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.2e-22 110.9 194 62.9
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 1.2e-22 110.9 190 63.2
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 1.5e-22 110.5 188 56.9
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.0e-22 110.2 188 61.7
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 7.5e-22 108.2 195 62.6
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 2.9e-21 106.3 190 58.4
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 4.9e-21 105.5 191 64.9
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 1.1e-20 104.4 170 59.4
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.4e-20 103.2 171 56.7
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.2e-20 102.8 149 71.8
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 9.2e-20 101.3 191 58.6
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 2.1e-19 100.1 148 70.3
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 6.0e-19 98.6 188 63.8
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 3.0e-18 96.3 145 66.9
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 3.9e-18 95.9 173 58.4
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 6.6e-18 95.1 146 54.8
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 6.6e-18 95.1 193 51.8
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 1.1e-17 94.4 207 50.7
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 1.9e-17 93.6 217 57.1
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.9e-17 93.6 203 42.4
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.5e-17 93.2 147 54.4
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.3e-17 92.8 188 58.0
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 4.3e-17 92.4 194 55.7
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 4.3e-17 92.4 188 52.7
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 7.3e-17 91.7 188 56.9
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 2.1e-16 90.1 191 62.3
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 3.6e-16 89.4 187 55.6
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 4.7e-16 89.0 193 56.0
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 4.7e-16 89.0 148 64.2
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 4.7e-16 89.0 194 53.6
vmacro19891 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 4.7e-16 89.0 273 48.4
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 8.1e-16 88.2 100 64.0
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 1.4e-15 87.4 69 71.0
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 1.8e-15 87.0 115 49.6
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 1.8e-15 87.0 69 69.6
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 3.1e-15 86.3 204 51.5
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 3.1e-15 86.3 188 56.4
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 3.1e-15 86.3 71 73.2
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 4.0e-15 85.9 68 72.1
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 5.2e-15 85.5 68 69.1
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 5.2e-15 85.5 114 47.4
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 8.9e-15 84.7 108 63.9
vmacro12779 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 8.9e-15 84.7 108 72.2
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 1.5e-14 84.0 191 49.7
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 2.6e-14 83.2 191 50.3
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.4e-14 82.4 69 69.6
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 4.4e-14 82.4 189 53.4
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 4.4e-14 82.4 68 64.7
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 5.8e-14 82.0 176 55.1
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 7.6e-14 81.6 189 50.8
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 1.3e-13 80.9 68 61.8
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 1.3e-13 80.9 115 54.8
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.7e-13 80.5 107 59.8
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 4.9e-13 79.0 196 46.4
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 6.4e-13 78.6 294 37.8
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.9e-12 77.0 218 53.7
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 3.2e-12 76.3 150 48.0
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 3.2e-12 76.3 68 63.2
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 9.2e-12 74.7 195 54.9
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 1.2e-11 74.3 226 43.8
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 2.1e-11 73.6 68 61.8
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 2.7e-11 73.2 68 60.3
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 2.7e-11 73.2 187 55.1
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.6e-11 72.4 177 50.3
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 6.0e-11 72.0 96 56.2
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 7.8e-11 71.6 73 49.3
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 1.0e-10 71.2 104 47.1
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 1.0e-10 71.2 117 59.8
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 1.7e-10 70.5 148 66.9
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 3.9e-10 69.3 45 84.4
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 5.1e-10 68.9 68 57.4
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 8.7e-10 68.2 68 57.4
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 8.7e-10 68.2 68 64.7
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 8.7e-10 68.2 68 57.4
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.5e-09 67.4 46 80.4
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 1.9e-09 67.0 68 64.7
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.9e-09 67.0 67 53.7
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.9e-09 67.0 113 49.6
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 1.9e-09 67.0 117 55.6
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 1.9e-09 67.0 68 57.4
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 2.5e-09 66.6 52 69.2
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.3e-09 66.2 117 57.3
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 3.3e-09 66.2 106 50.9
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.3e-09 65.9 68 58.8
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 4.3e-09 65.9 222 46.4
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 5.6e-09 65.5 68 64.7
Cc02_g22500 Coffea canephora HOM05D003347 ORTHO05D003821 5.6e-09 65.5 115 64.3
MD08G1229300 Malus domestica HOM05D003347 ORTHO05D003821 5.6e-09 65.5 144 55.6
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 7.3e-09 65.1 119 42.9
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 9.6e-09 64.7 119 41.2
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 1.2e-08 64.3 150 39.3
COL.COLO4_17865 Corchorus olitorius HOM05D003347 ORTHO05D003821 1.6e-08 63.9 146 61.6
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 1.6e-08 63.9 100 43.0
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 2.8e-08 63.2 119 49.6
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 3.6e-08 62.8 83 63.9
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 3.6e-08 62.8 61 55.7
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 4.7e-08 62.4 69 47.8
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 6.2e-08 62.0 44 75.0
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 1.1e-07 61.2 220 50.0
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 1.1e-07 61.2 58 55.2
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.4e-07 60.8 193 49.2
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 1.8e-07 60.5 72 55.6
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 1.8e-07 60.5 68 61.8
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.4e-07 60.1 143 60.8
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 3.1e-07 59.7 44 68.2
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 5.3e-07 58.9 72 55.6
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 5.3e-07 58.9 68 54.4
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 6.9e-07 58.5 68 55.9
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 1.2e-06 57.8 155 38.1
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 1.2e-06 57.8 173 50.9
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.5e-06 57.4 107 43.9
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 1.5e-06 57.4 44 63.6
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 2.0e-06 57.0 200 36.5
Rhsim11G0129400 Rhododendron simsii HOM05D003347 ORTHO05D007114 3.4e-06 56.2 50 72.0
Aa31LG11G7390 Aethionema arabicum HOM05D012923 ORTHO05D014747 5.8e-06 55.5 193 47.2
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 5.8e-06 55.5 149 57.7
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 7.6e-06 55.1 44 63.6
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 7.6e-06 55.1 44 65.9


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