Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 7.4e-75 283.9 153 100.0
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.0e-51 206.1 138 81.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 6.3e-50 201.1 153 72.5
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 8.3e-50 200.7 153 73.2
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.4e-49 199.9 143 76.2
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.8e-49 199.5 143 78.3
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 7.0e-49 197.6 142 73.2
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.5e-48 195.3 138 74.6
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 3.5e-48 195.3 142 74.6
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.5e-48 194.9 143 73.4
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 5.9e-48 194.5 142 73.2
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 2.9e-47 192.2 142 72.5
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 3.2e-46 188.7 143 71.3
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 3.2e-46 188.7 145 69.0
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.2e-46 188.7 142 71.1
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 2.1e-45 186.0 143 70.6
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.7e-45 185.7 149 65.8
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 4.7e-45 184.9 139 71.9
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 6.1e-45 184.5 139 68.3
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.0e-44 183.7 149 70.5
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 1.4e-44 183.3 147 65.3
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.2e-44 181.4 147 68.0
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.2e-44 181.4 144 68.1
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.2e-44 181.4 144 68.1
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 6.8e-44 181.0 142 68.3
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.2e-43 180.3 141 67.4
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.5e-43 179.9 150 64.0
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 2.6e-43 179.1 139 68.3
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 2.6e-43 179.1 132 72.7
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 3.4e-43 178.7 139 67.6
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 3.4e-43 178.7 132 73.5
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 7.5e-43 177.6 138 68.1
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 9.8e-43 177.2 129 71.3
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 9.8e-43 177.2 129 72.1
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 9.8e-43 177.2 129 72.1
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 9.8e-43 177.2 149 64.4
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.3e-42 176.8 129 71.3
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.2e-42 176.0 128 71.9
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 6.3e-42 174.5 150 65.3
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 1.1e-41 173.7 142 64.1
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.1e-41 173.7 141 66.0
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.4e-41 173.3 123 74.8
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.8e-41 172.9 139 64.7
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.8e-41 172.9 143 62.9
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.4e-41 172.6 143 64.3
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 4.1e-41 171.8 143 64.3
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.1e-41 171.8 143 64.3
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 9.2e-41 170.6 143 62.2
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.2e-40 170.2 125 70.4
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.6e-40 169.9 132 70.5
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.6e-40 169.9 150 63.3
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.6e-40 169.9 143 62.2
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 2.0e-40 169.5 148 61.5
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 2.0e-40 169.5 143 63.6
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 2.7e-40 169.1 146 61.0
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.5e-40 168.7 132 65.9
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 5.9e-40 167.9 123 74.8
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.0e-39 167.2 132 65.9
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.3e-39 166.8 131 67.2
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 2.3e-39 166.0 111 79.3
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.9e-39 165.6 143 60.8
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.9e-39 165.6 150 59.3
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 3.3e-38 162.2 142 59.9
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 4.3e-38 161.8 142 57.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 5.6e-38 161.4 150 58.0
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 5.6e-38 161.4 130 66.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.3e-38 161.0 150 58.0
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.3e-38 161.0 150 58.0
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.6e-37 159.8 130 63.1
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.1e-37 159.5 134 60.4
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 2.8e-37 159.1 143 65.0
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 3.6e-37 158.7 142 58.5
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 6.1e-37 157.9 142 57.0
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 8.0e-37 157.5 130 62.3
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.4e-36 156.8 144 57.6
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.8e-36 156.4 129 62.8
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 2.3e-36 156.0 121 67.8
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 3.0e-36 155.6 141 59.6
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 4.0e-36 155.2 131 63.4
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 6.8e-36 154.5 131 62.6
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 8.9e-36 154.1 131 60.3
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 8.9e-36 154.1 113 68.1
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.0e-35 152.9 134 58.2
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 2.6e-35 152.5 144 54.9
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 2.6e-35 152.5 144 54.9
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.4e-35 152.1 145 57.9
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 5.7e-35 151.4 134 63.4
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.9e-34 149.1 172 50.6
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 2.9e-34 149.1 124 64.5
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 4.9e-34 148.3 201 47.8
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 6.4e-34 147.9 141 56.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 6.4e-34 147.9 141 56.0
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 8.3e-34 147.5 123 65.9
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 8.3e-34 147.5 141 55.3
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 8.3e-34 147.5 141 55.3
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.1e-33 147.1 141 56.0
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.8e-33 146.4 141 56.7
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.8e-33 146.4 134 60.4
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.4e-33 146.0 128 59.4
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 3.2e-33 145.6 131 58.8
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.1e-33 145.2 128 60.9
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 7.0e-33 144.4 137 58.4
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 7.0e-33 144.4 131 61.1
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.2e-32 143.7 181 47.5
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.6e-32 143.3 144 54.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.0e-32 142.9 143 55.9
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.7e-31 139.8 113 69.0
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.5e-30 136.7 131 55.7
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 4.3e-30 135.2 110 67.3
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.8e-29 132.5 131 55.0
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.8e-29 132.5 143 49.0
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 6.2e-29 131.3 131 54.2
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 6.8e-28 127.9 107 62.6
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 7.5e-27 124.4 112 63.4
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 8.3e-26 120.9 145 53.1
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.4e-25 119.4 291 32.6
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 3.3e-22 109.0 72 80.6
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 5.2e-20 101.7 101 58.4
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 9.8e-19 97.4 135 42.2
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.3e-18 97.1 70 68.6
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.9e-15 85.5 137 41.6
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.9e-14 83.2 135 41.5
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.5e-14 82.8 115 43.5
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 1.4e-12 77.0 73 58.9
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 7.6e-11 71.2 54 72.2
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.1e-06 57.4 53 58.5


User provided reference genes

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