Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.0e-75 283.9 145 100.0
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.2e-71 270.8 145 95.9
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.4e-68 260.8 145 92.4
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-64 249.2 144 90.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-64 249.2 144 90.3
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 5.2e-62 241.1 144 86.8
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 3.2e-59 231.9 144 83.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.2e-58 229.9 144 81.9
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.5e-58 228.4 144 81.9
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.6e-58 228.0 144 81.9
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 7.8e-58 227.3 144 81.2
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.0e-57 226.9 144 81.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.3e-57 226.5 145 84.8
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 1.7e-57 226.1 143 80.4
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.3e-57 225.7 144 81.2
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 2.3e-57 225.7 144 81.2
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 3.0e-57 225.3 144 79.2
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 3.9e-57 224.9 144 80.6
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 6.6e-57 224.2 144 79.2
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 8.6e-57 223.8 144 79.2
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 7.3e-56 220.7 144 78.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.2e-55 219.9 144 77.1
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.6e-55 219.5 144 79.9
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.6e-55 219.5 144 78.5
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.1e-55 219.2 144 77.1
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.1e-55 219.2 144 77.1
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 4.7e-55 218.0 144 77.8
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 4.7e-55 218.0 144 77.1
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 6.2e-55 217.6 144 77.1
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 8.1e-55 217.2 144 78.5
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 8.1e-55 217.2 144 77.1
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.1e-54 216.9 144 77.1
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.8e-54 216.1 144 76.4
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 4.0e-54 214.9 144 75.7
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 4.0e-54 214.9 144 76.4
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 5.2e-54 214.5 143 78.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 6.8e-54 214.2 144 76.4
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 6.8e-54 214.2 144 78.5
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.2e-53 213.4 144 77.1
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 1.5e-53 213.0 144 75.0
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 2.0e-53 212.6 144 75.7
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.4e-53 211.8 144 77.1
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 3.4e-53 211.8 144 76.4
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 4.4e-53 211.5 144 75.0
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 5.8e-53 211.1 131 84.0
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 5.8e-53 211.1 144 75.7
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 5.8e-53 211.1 144 75.7
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 7.6e-53 210.7 144 73.6
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 9.9e-53 210.3 144 74.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.9e-53 210.3 144 75.0
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.7e-52 209.5 144 75.0
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.9e-52 208.8 144 75.0
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 4.9e-52 208.0 144 72.9
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 6.4e-52 207.6 144 74.3
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.1e-51 206.8 144 72.2
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 1.4e-51 206.5 144 73.6
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 1.4e-51 206.5 144 73.6
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.4e-51 206.5 128 82.0
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.4e-51 205.7 144 76.4
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 3.2e-51 205.3 144 71.5
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 4.1e-51 204.9 144 71.5
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 4.1e-51 204.9 144 71.5
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 5.4e-51 204.5 144 71.5
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 7.1e-51 204.1 144 74.3
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 9.2e-51 203.8 144 72.2
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.6e-50 203.0 144 70.1
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 4.6e-50 201.4 142 73.2
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 6.0e-50 201.1 144 72.2
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.7e-49 199.5 144 72.9
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.3e-49 199.1 143 70.6
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.3e-49 199.1 141 72.3
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.0e-49 198.7 144 70.8
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 3.0e-49 198.7 144 70.8
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.9e-49 198.4 145 71.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 8.7e-49 197.2 146 69.2
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.1e-48 196.8 145 72.4
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 4.3e-48 194.9 145 71.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 4.3e-48 194.9 144 69.4
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 7.3e-48 194.1 145 69.7
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 7.3e-48 194.1 145 69.7
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 9.6e-48 193.7 145 69.7
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.2e-47 193.4 146 69.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.6e-47 193.0 145 68.3
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.1e-47 192.6 143 70.6
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.1e-47 192.6 145 71.0
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 2.1e-47 192.6 145 70.3
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.8e-47 192.2 144 70.8
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 3.6e-47 191.8 145 70.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.6e-47 191.8 144 70.8
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.7e-47 191.4 143 67.8
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 1.4e-46 189.9 145 67.6
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.4e-46 189.9 145 67.6
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.0e-46 188.3 144 70.1
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.9e-46 187.6 144 66.7
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 3.8e-44 181.8 159 64.2
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.1e-42 176.0 144 66.0
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 6.0e-42 174.5 145 65.5
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 3.3e-40 168.7 144 63.9
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.1e-38 163.7 145 62.8
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.0e-37 159.5 146 61.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 3.4e-37 158.7 145 60.0
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.6e-34 149.8 144 59.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.9e-33 145.2 145 56.6
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.9e-33 145.2 145 56.6
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.3e-32 142.1 81 91.4
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.3e-32 141.7 139 57.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 4.0e-30 135.2 134 55.2
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 4.5e-29 131.7 134 56.0
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 3.0e-25 119.0 133 49.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.9e-24 116.3 139 46.8
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.3e-23 113.6 136 53.7
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.1e-22 110.5 137 52.6
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.1e-22 109.0 85 65.9
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.3e-20 103.6 134 44.8
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 1.1e-19 100.5 138 46.4
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 4.3e-16 88.6 143 39.2
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 3.1e-14 82.4 131 38.9
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 8.8e-09 64.3 128 38.3
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 2.8e-07 59.3 41 61.0


User provided reference genes

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