Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 9.7e-151 537.0 304 100.0
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 7.6e-71 271.6 302 55.6
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 3.6e-65 252.7 312 51.9
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.4e-64 250.8 306 50.0
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 7.1e-61 238.4 304 50.3
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 6.0e-60 235.3 305 49.5
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.0e-59 234.6 310 48.7
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 6.2e-57 225.3 306 48.7
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 1.4e-56 224.2 304 48.7
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 8.4e-54 214.9 311 49.5
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 1.4e-53 214.2 300 46.0
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 1.2e-52 211.1 309 46.3
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 3.9e-51 206.1 308 48.1
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 8.7e-51 204.9 290 45.5
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 2.1e-49 200.3 307 45.9
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 6.9e-48 195.3 301 43.2
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.0e-47 193.7 297 44.8
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.4e-45 187.6 302 44.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 9.3e-45 184.9 326 44.8
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.2e-44 184.5 307 42.3
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 3.5e-44 183.0 304 43.1
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 7.9e-44 181.8 306 42.2
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 7.9e-44 181.8 310 41.9
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.8e-43 180.6 311 40.5
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 6.7e-43 178.7 308 41.9
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 8.7e-43 178.3 289 44.3
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.5e-42 177.6 306 41.5
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.5e-42 176.8 294 44.2
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 5.7e-42 175.6 314 42.0
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 7.4e-42 175.3 256 44.1
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 9.6e-42 174.9 324 39.8
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.1e-41 173.7 307 38.8
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 2.1e-41 173.7 318 40.3
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 2.1e-41 173.7 322 40.7
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 8.2e-41 171.8 321 41.7
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.1e-40 171.4 321 40.2
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.1e-40 171.4 321 41.1
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 2.4e-40 170.2 295 40.3
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 5.3e-40 169.1 292 41.8
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 1.2e-39 167.9 301 40.9
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 2.0e-39 167.2 307 38.4
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 7.6e-39 165.2 286 41.3
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 2.2e-38 163.7 321 39.3
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 5.0e-38 162.5 280 40.0
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 5.0e-38 162.5 303 39.9
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 6.5e-38 162.2 303 39.6
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.4e-37 161.0 299 38.1
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.9e-37 160.6 280 39.6
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 4.2e-37 159.5 300 38.0
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 9.3e-37 158.3 308 38.3
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 4.6e-36 156.0 292 38.7
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 1.0e-35 154.8 304 38.5
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 1.3e-35 154.5 300 39.7
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.8e-35 154.1 286 39.2
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.3e-35 153.7 298 37.6
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 5.1e-35 152.5 293 38.9
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 5.1e-35 152.5 293 38.9
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.7e-35 151.8 306 36.9
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 8.7e-35 151.8 314 36.9
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.1e-34 151.4 293 39.6
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 1.5e-34 151.0 308 34.4
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 3.3e-34 149.8 295 39.0
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.3e-34 149.8 290 37.6
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 3.3e-34 149.8 294 36.7
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 3.3e-34 149.8 305 37.4
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 3.3e-34 149.8 306 34.6
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 7.4e-34 148.7 305 37.4
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 9.7e-34 148.3 302 38.4
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.3e-33 147.9 268 39.6
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 1.6e-33 147.5 148 52.7
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 4.8e-33 146.0 307 35.8
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 6.3e-33 145.6 303 37.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 8.2e-33 145.2 293 38.9
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.1e-32 144.8 149 52.3
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.4e-32 143.7 307 33.6
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 5.3e-32 142.5 308 36.7
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 9.0e-32 141.7 114 63.2
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 3.4e-31 139.8 300 36.3
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 7.7e-31 138.7 235 36.6
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 2.2e-30 137.1 120 55.8
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 2.2e-30 137.1 120 55.8
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.9e-30 136.7 300 36.3
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 6.5e-30 135.6 290 38.3
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 8.5e-30 135.2 312 33.0
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 1.4e-29 134.4 298 36.9
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.9e-29 134.0 276 33.7
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.9e-29 134.0 128 54.7
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 5.5e-29 132.5 121 53.7
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 5.5e-29 132.5 134 51.5
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 7.2e-29 132.1 307 39.1
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.1e-28 130.6 292 36.6
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 2.7e-28 130.2 296 36.5
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 4.6e-28 129.4 284 33.5
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.0e-27 128.3 276 38.0
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.4e-27 127.9 302 36.4
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.3e-27 127.1 296 35.8
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 5.1e-27 125.9 121 51.2
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.3e-26 123.2 96 63.5
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.3e-26 123.2 96 61.5
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 5.7e-26 122.5 119 52.9
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.3e-25 121.3 281 34.9
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 6.3e-25 119.0 115 55.7
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.1e-24 118.2 98 58.2
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 3.1e-24 116.7 107 57.0
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 3.1e-24 116.7 107 57.0
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 3.1e-24 116.7 103 58.3
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 3.1e-24 116.7 93 61.3
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.5e-23 112.8 259 35.5
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-21 107.8 299 31.4
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 3.2e-21 106.7 251 35.5
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 3.9e-19 99.8 93 51.6
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.1e-18 98.2 104 50.0
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 6.3e-17 92.4 81 63.0
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.8e-16 90.9 102 52.9
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.3e-11 73.9 54 61.1
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 4.0e-11 73.2 103 38.8
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 8.8e-11 72.0 266 28.2
TAR624G0439 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.1e-10 71.6 89 48.3
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 7.5e-10 68.9 108 35.2
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 2.2e-09 67.4 44 65.9
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 1.1e-08 65.1 107 38.3
TAR633G1981 Trochodendron aralioides HOM05D000472 ORTHO05D000344 2.0e-07 60.8 38 68.4
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.2e-06 57.4 70 41.4
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 5.0e-06 56.2 86 36.0


User provided reference genes

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