Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.1e-81 304.7 155 100.0
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.4e-73 279.6 155 95.5
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 4.3e-62 241.5 155 79.4
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.6e-61 239.6 155 79.4
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.1e-61 239.2 163 77.9
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.2e-59 233.4 155 76.8
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 2.2e-58 229.2 155 77.4
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 2.7e-56 222.2 155 74.8
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 7.8e-56 220.7 155 73.5
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 2.5e-54 215.7 155 71.6
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 2.5e-54 215.7 154 71.4
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.1e-52 210.3 155 71.0
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 6.8e-52 207.6 155 72.3
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.2e-51 206.8 155 71.6
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 4.4e-51 204.9 155 72.3
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.3e-50 203.4 155 69.7
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 4.9e-50 201.4 158 68.4
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 6.4e-50 201.1 155 69.7
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 8.4e-50 200.7 155 65.8
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 8.4e-50 200.7 156 70.5
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.4e-49 198.0 155 68.4
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.1e-49 197.6 155 68.4
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 9.2e-49 197.2 158 67.7
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 9.2e-49 197.2 155 68.4
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.2e-48 196.8 155 67.7
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.2e-48 196.8 155 68.4
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.6e-48 196.4 155 65.8
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 2.1e-48 196.1 156 70.5
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.7e-48 195.7 155 63.2
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 4.6e-48 194.9 155 66.5
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.6e-48 194.9 155 67.7
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.8e-48 194.1 155 67.7
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.0e-47 193.7 155 63.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.7e-47 193.0 155 67.7
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.5e-46 189.9 157 66.9
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.5e-46 189.9 155 61.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.5e-46 189.9 124 80.6
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.3e-46 188.7 157 66.2
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.3e-46 188.3 157 66.2
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 4.3e-46 188.3 156 67.3
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 5.6e-46 188.0 154 68.2
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 7.3e-46 187.6 150 66.7
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 7.3e-46 187.6 155 64.5
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.6e-45 186.4 157 65.6
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.6e-45 186.4 158 63.3
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 4.8e-45 184.9 154 65.6
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.4e-44 183.3 157 64.3
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.4e-44 183.3 157 64.3
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.4e-44 183.3 155 61.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 3.1e-44 182.2 155 61.9
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 5.3e-44 181.4 155 63.9
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.0e-44 180.6 155 65.8
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.5e-43 179.9 155 65.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 4.4e-43 178.3 156 62.2
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 5.8e-43 177.9 155 59.4
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-42 176.8 155 63.2
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.7e-42 176.4 152 58.6
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.7e-42 176.4 156 62.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.7e-42 176.4 156 61.5
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 2.2e-42 176.0 155 63.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.9e-42 174.9 154 63.6
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 6.4e-42 174.5 156 62.2
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 8.4e-42 174.1 164 63.4
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.4e-42 174.1 155 63.9
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.1e-41 173.7 155 61.9
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 9.3e-41 170.6 155 61.3
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.6e-40 169.9 154 63.6
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.0e-39 167.2 155 62.6
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.0e-39 167.2 155 61.3
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.3e-39 166.8 153 60.1
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.7e-39 166.4 153 59.5
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.3e-38 162.2 155 58.7
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.1e-37 159.5 159 56.6
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.0e-36 155.2 156 53.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 4.0e-36 155.2 157 58.6
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-35 152.9 145 61.4
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 2.0e-35 152.9 156 55.1
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 5.8e-35 151.4 156 60.9
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 5.8e-35 151.4 156 56.4
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 7.6e-35 151.0 149 59.7
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 7.6e-35 151.0 155 56.1
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 7.6e-35 151.0 155 56.1
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 9.9e-35 150.6 153 52.3
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.2e-34 149.4 153 51.6
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 4.9e-34 148.3 177 52.5
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 4.9e-34 148.3 90 86.7
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 9.3e-33 144.1 118 66.9
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 9.3e-33 144.1 118 69.5
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.2e-32 143.7 116 67.2
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.6e-32 143.3 99 75.8
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.8e-31 139.8 119 64.7
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 3.9e-31 138.7 116 67.2
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 6.7e-31 137.9 99 73.7
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 7.4e-30 134.4 99 71.7
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 4.8e-29 131.7 115 64.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 4.8e-29 131.7 115 64.3
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.4e-28 129.4 115 63.5
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 3.1e-28 129.0 99 69.7
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.5e-26 121.3 167 41.9
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.3e-22 109.0 60 90.0
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 3.1e-20 102.4 85 69.4
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.2e-19 100.5 60 81.7
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.2e-19 100.5 60 81.7
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-18 97.1 155 42.6
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 2.3e-15 86.3 151 36.4
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 1.9e-14 83.2 59 76.3
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 5.7e-14 81.6 92 55.4
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.6e-13 80.1 55 74.5
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 2.8e-13 79.3 49 77.6
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 3.2e-09 65.9 91 37.4


User provided reference genes

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