Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.6e-169 599.4 299 100.0
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 9.4e-66 254.6 280 57.1
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 2.0e-63 246.9 315 50.5
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.1e-32 144.8 270 41.5
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 4.1e-29 132.9 155 51.6
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 3.5e-28 129.8 311 38.3
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 3.0e-27 126.7 309 38.8
Lj7A493T43 Lonicera japonica HOM05D006718 ORTHO05D008492 1.6e-25 120.9 351 35.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 3.1e-24 116.7 299 36.5
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 2.0e-23 114.0 266 36.8
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.0e-19 101.7 302 33.8
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.7e-19 100.9 289 34.3
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 5.6e-18 95.9 243 39.1
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 2.8e-17 93.6 286 31.8
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 8.9e-16 88.6 265 34.7
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.2e-15 88.2 287 33.8
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 4.9e-14 82.8 256 36.3
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 9.2e-13 78.6 303 33.0
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 1.6e-12 77.8 257 36.6
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.6e-12 77.8 310 33.5
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 3.5e-12 76.6 265 33.6
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 3.0e-11 73.6 290 31.7
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 3.9e-11 73.2 290 32.4
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 6.6e-11 72.4 272 30.5
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 8.7e-11 72.0 289 31.5
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.1e-08 63.5 278 31.7
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 4.0e-08 63.2 281 32.0
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 6.9e-08 62.4 241 32.8
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 1.2e-07 61.6 250 32.4
Lsat_1_v5_gn_4_139860 Lactuca sativa HOM05D006718 ORTHO05D008492 3.4e-07 60.1 164 35.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 3.4e-07 60.1 274 31.0
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 4.4e-07 59.7 300 31.7
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 5.8e-07 59.3 294 28.2
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.3e-06 58.2 280 31.8
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 2.2e-06 57.4 193 33.2
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 2.9e-06 57.0 118 39.0
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 3.8e-06 56.6 304 29.6


User provided reference genes

Program Settings