Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 7.1e-267 923.3 453 100.0
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 3.3e-123 446.0 488 53.7
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 5.4e-97 359.0 480 45.6
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 9.5e-94 348.2 505 43.0
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 1.3e-90 337.8 481 42.0
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 2.2e-90 337.0 485 44.3
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 4.1e-89 332.8 478 43.5
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 4.6e-88 329.3 526 40.3
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 6.0e-88 328.9 504 39.3
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 7.8e-88 328.6 488 42.8
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.0e-87 328.2 486 44.2
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 3.3e-86 323.2 499 41.9
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 5.6e-86 322.4 474 44.3
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 5.6e-86 322.4 507 38.9
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 7.3e-86 322.0 486 42.0
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.8e-84 317.4 485 42.3
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 5.8e-83 312.4 478 42.1
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 9.8e-83 311.6 486 41.6
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.9e-81 307.4 665 36.4
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 2.4e-81 307.0 481 41.6
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 9.2e-81 305.1 482 40.5
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 1.2e-80 304.7 480 40.4
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 1.6e-80 304.3 511 38.7
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 2.1e-80 303.9 429 43.8
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.3e-79 301.2 470 39.1
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 2.5e-78 297.0 509 39.5
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 4.3e-78 296.2 485 39.4
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 5.6e-78 295.8 473 40.6
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 1.6e-77 294.3 509 40.5
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 2.1e-77 293.9 483 40.0
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 2.1e-77 293.9 482 39.0
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 2.8e-77 293.5 508 38.0
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 3.6e-77 293.1 495 39.6
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 6.2e-77 292.4 203 68.0
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 8.1e-77 292.0 478 39.1
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.4e-76 291.2 491 38.5
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.1e-76 290.0 473 41.2
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 5.2e-76 289.3 486 39.5
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 5.2e-76 289.3 509 40.1
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 2.0e-75 287.3 486 38.9
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 4.4e-75 286.2 204 68.6
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 9.9e-75 285.0 509 38.5
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 1.3e-74 284.6 497 38.0
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.7e-74 284.3 488 38.7
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 2.2e-74 283.9 499 37.3
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 2.9e-74 283.5 485 39.0
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 1.1e-73 281.6 504 38.5
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 3.2e-73 280.0 507 38.1
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 3.2e-73 280.0 204 65.2
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 3.5e-72 276.6 505 38.0
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 3.5e-72 276.6 481 38.5
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 1.7e-71 274.2 611 34.5
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 5.1e-71 272.7 503 38.2
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.1e-70 271.6 504 36.9
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 1.5e-70 271.2 502 37.1
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 2.5e-70 270.4 478 37.7
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 4.3e-70 269.6 504 35.5
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 5.6e-70 269.2 506 35.2
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 9.5e-70 268.5 477 37.1
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 1.2e-69 268.1 505 36.6
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 2.1e-69 267.3 481 37.2
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 4.7e-69 266.2 501 37.3
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 4.7e-69 266.2 501 36.3
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 1.4e-68 264.6 505 35.2
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 2.6e-67 260.4 484 38.0
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 5.8e-67 259.2 481 38.5
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 1.3e-66 258.1 202 65.3
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 6.4e-66 255.8 485 37.1
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 1.1e-65 255.0 510 36.5
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 1.4e-65 254.6 229 55.9
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 2.1e-64 250.8 488 35.9
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.7e-64 250.4 203 60.1
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 7.8e-64 248.8 491 35.0
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 8.7e-63 245.4 231 55.8
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.1e-62 245.0 237 56.5
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 5.6e-62 242.7 453 36.6
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 5.8e-59 232.6 482 33.8
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 3.9e-55 219.9 453 35.3
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 1.5e-54 218.0 197 57.4
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 9.6e-54 215.3 397 37.5
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 1.3e-53 214.9 476 35.3
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 5.3e-52 209.5 495 31.7
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 3.8e-50 203.4 507 31.8
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 3.0e-47 193.7 478 29.9
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 6.7e-47 192.6 204 50.5
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 8.7e-47 192.2 491 30.3
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 3.7e-45 186.8 406 33.7
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 5.8e-43 179.5 137 60.6
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 1.7e-42 177.9 363 34.2
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 2.7e-40 170.6 414 32.6
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 4.6e-40 169.9 163 52.1
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 3.9e-39 166.8 417 32.1
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 6.2e-37 159.5 128 64.1
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 5.5e-33 146.4 220 35.9
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 1.2e-32 145.2 94 67.0
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 1.9e-30 137.9 300 35.3
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 1.1e-28 132.1 75 72.0
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 9.0e-28 129.0 218 34.9
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 2.2e-26 124.4 73 74.0
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 2.2e-26 124.4 100 65.0
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 1.4e-23 115.2 97 63.9
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 5.1e-23 113.2 198 34.3
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 2.4e-20 104.4 132 42.4
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 3.2e-17 94.0 108 48.1
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 5.5e-17 93.2 97 53.6
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 9.4e-17 92.4 93 50.5
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 1.0e-15 89.0 233 27.9
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 3.0e-15 87.4 189 29.6
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 3.1e-12 77.4 103 44.7
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 1.5e-11 75.1 97 43.3
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 2.6e-11 74.3 312 24.4
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 1.2e-08 65.5 102 42.2
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 1.2e-08 65.5 102 42.2
Atru.chr1.2967 Acer truncatum HOM05D005725 ORTHO05D007531 4.7e-08 63.5 122 36.1
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 5.2e-07 60.1 58 53.4
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 1.1e-06 58.9 138 37.0
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 1.1e-06 58.9 138 37.0


User provided reference genes

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