Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.2e-70 268.9 136 100.0
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 1.4e-56 223.0 114 98.2
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 2.5e-50 202.2 114 88.6
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 9.0e-48 193.7 112 86.6
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.7e-46 189.5 114 81.6
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.7e-46 189.5 114 81.6
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 2.4e-45 185.7 114 78.9
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 4.6e-44 181.4 114 78.9
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.3e-43 179.1 114 73.7
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 1.9e-42 176.0 114 78.1
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 4.3e-42 174.9 114 74.6
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 5.6e-42 174.5 114 74.6
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 9.6e-42 173.7 114 77.2
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 2.8e-41 172.2 114 74.6
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 3.7e-41 171.8 114 71.1
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 3.7e-41 171.8 114 73.7
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 4.8e-41 171.4 114 72.8
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 8.1e-41 170.6 114 74.6
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.8e-40 169.5 114 73.7
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 2.4e-40 169.1 114 72.8
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 2.4e-40 169.1 124 70.2
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 3.1e-40 168.7 114 72.8
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 4.0e-40 168.3 114 71.9
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 5.3e-40 167.9 114 71.9
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 6.9e-40 167.5 114 78.1
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 6.9e-40 167.5 114 71.9
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 9.0e-40 167.2 114 71.1
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 1.2e-39 166.8 114 71.9
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 1.5e-39 166.4 114 71.9
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 2.0e-39 166.0 114 67.5
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 2.6e-39 165.6 111 73.0
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 3.4e-39 165.2 114 70.2
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 5.8e-39 164.5 114 71.9
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 7.6e-39 164.1 114 70.2
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 7.6e-39 164.1 114 72.8
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 9.9e-39 163.7 114 71.9
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 9.9e-39 163.7 114 67.5
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 9.9e-39 163.7 114 67.5
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 1.3e-38 163.3 114 68.4
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.3e-38 163.3 114 71.9
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 1.3e-38 163.3 115 71.3
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 1.7e-38 162.9 114 71.9
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 1.7e-38 162.9 114 72.8
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 1.7e-38 162.9 114 74.6
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 2.2e-38 162.5 114 68.4
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 2.9e-38 162.2 114 71.9
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 3.8e-38 161.8 116 69.8
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 8.4e-38 160.6 114 69.3
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 8.4e-38 160.6 114 71.1
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 1.1e-37 160.2 113 70.8
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 1.1e-37 160.2 114 69.3
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.4e-37 159.8 114 69.3
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.4e-37 159.8 114 69.3
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 1.4e-37 159.8 114 71.1
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 2.4e-37 159.1 114 65.8
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 3.2e-37 158.7 114 71.1
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 4.2e-37 158.3 114 68.4
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 4.2e-37 158.3 114 73.7
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 5.5e-37 157.9 114 66.7
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 5.5e-37 157.9 114 70.2
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 1.2e-36 156.8 114 67.5
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.2e-36 156.8 110 67.3
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.6e-36 156.4 114 65.8
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 1.6e-36 156.4 114 66.7
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 2.7e-36 155.6 114 72.8
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 3.5e-36 155.2 93 84.9
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 6.0e-36 154.5 114 67.5
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 6.0e-36 154.5 114 64.9
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 7.9e-36 154.1 114 71.9
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 1.0e-35 153.7 114 67.5
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.3e-35 153.3 114 66.7
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 1.3e-35 153.3 114 71.1
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 1.3e-35 153.3 114 65.8
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 1.3e-35 153.3 114 68.4
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 1.8e-35 152.9 114 69.3
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 3.0e-35 152.1 117 63.2
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 3.9e-35 151.8 114 64.0
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 8.7e-35 150.6 113 65.5
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 8.7e-35 150.6 114 68.4
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.9e-34 149.4 114 64.0
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 3.3e-34 148.7 114 64.0
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 1.6e-33 146.4 114 62.3
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 6.2e-33 144.4 115 64.3
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.1e-32 143.7 118 61.9
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 4.0e-32 141.7 101 71.3
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 4.0e-32 141.7 114 60.5
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 1.2e-31 140.2 114 60.5
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 1.5e-31 139.8 114 60.5
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 3.4e-31 138.7 114 60.5
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 4.5e-31 138.3 114 61.4
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 5.8e-31 137.9 114 59.6
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 5.8e-31 137.9 114 59.6
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 1.7e-30 136.3 114 58.8
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 2.9e-30 135.6 123 57.7
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 2.9e-30 135.6 113 59.3
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.5e-29 132.5 117 58.1
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 2.5e-29 132.5 113 61.1
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 3.2e-29 132.1 113 56.6
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 2.1e-28 129.4 115 59.1
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 3.5e-28 128.6 114 57.0
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 1.8e-27 126.3 113 55.8
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 1.8e-27 126.3 113 55.8
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 1.8e-27 126.3 113 55.8
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 1.5e-26 123.2 112 59.8
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 3.3e-26 122.1 137 49.6
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 2.2e-25 119.4 103 59.2
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 8.2e-25 117.5 101 59.4
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 3.1e-24 115.5 103 59.2
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 3.4e-23 112.1 113 51.3
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 1.0e-19 100.5 144 38.2
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 3.7e-09 65.5 99 41.4
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 3.4e-07 58.9 50 60.0
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 5.9e-07 58.2 53 58.5
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 5.9e-07 58.2 53 58.5
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 6.5e-06 54.7 32 78.1


User provided reference genes

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