Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029995 Camellia sinensis var. sinensis HOM05D005281 ORTHO05D006351 4.2e-176 621.3 324 100.0
Actinidia23889 Actinidia chinensis HOM05D005281 ORTHO05D006351 2.0e-53 213.8 188 66.5
vmacro14592 Vaccinium macrocarpon HOM05D005281 ORTHO05D006351 4.6e-42 176.0 310 44.2
Rhsim01G0236400 Rhododendron simsii HOM05D005281 ORTHO05D006351 5.1e-41 172.6 317 42.3
Dinv14436 Davidia involucrata HOM05D005281 ORTHO05D006351 1.9e-40 170.6 315 40.0
Hma1.2p1_0962F.1_g241910 Hydrangea macrophylla HOM05D005281 ORTHO05D006351 1.1e-38 164.9 324 39.5
Lj1C137G10 Lonicera japonica HOM05D005281 ORTHO05D006351 1.1e-38 164.9 187 54.0
GSVIVG01024739001 Vitis vinifera HOM05D005281 ORTHO05D006351 1.3e-33 147.9 176 52.8
TAR633G1154 Trochodendron aralioides HOM05D005281 ORTHO05D006351 3.1e-30 136.7 194 49.0
Migut.N00784 Erythranthe guttata HOM05D005281 ORTHO05D006351 9.0e-30 135.2 183 45.9
Sc21g0006330 Simmondsia chinensis HOM05D005281 ORTHO05D006351 1.5e-29 134.4 190 48.9
EL10Ac7g16168 Beta vulgaris HOM05D005281 ORTHO05D006351 2.0e-29 134.0 189 42.3
Sopen06g002070 Solanum pennellii HOM05D005281 ORTHO05D006351 3.4e-29 133.3 191 47.6
AUR62001645 Chenopodium quinoa HOM05D005281 ORTHO05D006351 1.7e-28 131.0 192 45.3
Potri.009G046300 Populus trichocarpa HOM05D005281 ORTHO05D006351 2.2e-28 130.6 207 44.4
Sabra09G0033400 Salix brachista HOM05D005281 ORTHO05D006351 2.9e-28 130.2 211 44.1
PGSC0003DMG400004159 Solanum tuberosum HOM05D005281 ORTHO05D006351 6.5e-28 129.0 191 46.6
Manes.01G161500 Manihot esculenta HOM05D005281 ORTHO05D006351 8.4e-28 128.6 196 46.4
Nn2g11502 Nelumbo nucifera HOM05D005281 ORTHO05D006351 4.2e-27 126.3 186 48.9
Duzib168G1083 Durio zibethinus HOM05D005281 ORTHO05D006351 7.1e-27 125.6 205 45.4
THA.LOC104799394 Tarenaya hassleriana HOM05D005281 ORTHO05D006351 9.3e-27 125.2 298 35.9
Cfa011695 Carpinus fangiana HOM05D005476 ORTHO05D006886 1.2e-26 124.8 176 45.5
Hund04860 Selenicereus undatus HOM05D005281 ORTHO05D006351 1.6e-26 124.4 189 43.4
AUR62020131 Chenopodium quinoa HOM05D005281 ORTHO05D006351 2.7e-26 123.6 156 48.1
CANSAT54G2372 Cannabis sativa HOM05D005281 ORTHO05D006351 3.5e-26 123.2 187 43.9
CARHR272630 Cardamine hirsuta HOM05D005281 ORTHO05D006351 3.5e-26 123.2 166 48.2
Cpa.g.sc415.3 Carica papaya HOM05D005281 ORTHO05D006351 3.5e-26 123.2 204 43.6
SGA_v2.0_scaffold120G32911 Striga asiatica HOM05D005281 ORTHO05D006351 7.9e-26 122.1 193 45.6
AL8G35000 Arabidopsis lyrata HOM05D005281 ORTHO05D006351 1.0e-25 121.7 211 42.7
C03p14150 Brassica napus HOM05D005281 ORTHO05D006351 2.3e-25 120.6 193 44.6
BolC3t13861H Brassica oleracea HOM05D005281 ORTHO05D006351 3.0e-25 120.2 192 44.8
Aa31LG11G480 Aethionema arabicum HOM05D005281 ORTHO05D006351 6.7e-25 119.0 166 47.0
Thhalv10013268m.g Eutrema salsugineum HOM05D005281 ORTHO05D006351 6.7e-25 119.0 253 38.3
Nitab4.5_0000102g0060 Nicotiana tabacum HOM05D005281 ORTHO05D006351 6.7e-25 119.0 186 44.6
Nitab4.5_0005463g0020 Nicotiana tabacum HOM05D005281 ORTHO05D006351 6.7e-25 119.0 186 44.6
A03p12060 Brassica napus HOM05D005281 ORTHO05D006351 1.1e-24 118.2 197 45.2
QL01p038286 Quercus lobata HOM05D005281 ORTHO05D006351 1.1e-24 118.2 195 43.1
Phvul.006G068100 Phaseolus vulgaris HOM05D005281 ORTHO05D006351 1.9e-24 117.5 196 43.9
AT5G58720 Arabidopsis thaliana HOM05D005281 ORTHO05D006351 2.5e-24 117.1 210 41.9
Ah.15g100330 Amaranthus hybridus HOM05D005281 ORTHO05D013988 5.7e-24 115.9 197 41.6
Prupe.6G057400 Prunus persica HOM05D005281 ORTHO05D006351 7.4e-24 115.5 201 40.3
BraA03t10518Z Brassica rapa HOM05D005281 ORTHO05D006351 9.7e-24 115.2 178 47.2
Carub.0008s1934 Capsella rubella HOM05D005281 ORTHO05D006351 1.6e-23 114.4 260 38.1
BraA02t05834Z Brassica rapa HOM05D005281 ORTHO05D006351 6.3e-23 112.5 257 36.2
A02p07560 Brassica napus HOM05D005281 ORTHO05D006351 8.2e-23 112.1 257 35.8
BcaC03g14078 Brassica carinata HOM05D005281 ORTHO05D006351 1.1e-22 111.7 176 42.6
C02p13130 Brassica napus HOM05D005281 ORTHO05D006351 1.1e-22 111.7 170 42.9
BolC2t07431H Brassica oleracea HOM05D005281 ORTHO05D006351 1.1e-22 111.7 170 42.9
Thecc.09G301700 Theobroma cacao HOM05D005281 ORTHO05D006351 1.4e-22 111.3 205 42.9
COL.COLO4_19159 Corchorus olitorius HOM05D005281 ORTHO05D006351 3.1e-22 110.2 154 47.4
FAN25G0418 Fragaria x ananassa HOM05D005281 ORTHO05D006351 3.1e-22 110.2 203 43.3
Cc01_g14190 Coffea canephora HOM05D005281 ORTHO05D006351 4.1e-22 109.8 166 44.6
FAN21G2151 Fragaria x ananassa HOM05D005281 ORTHO05D006351 4.1e-22 109.8 203 41.9
Sp6g20410 Schrenkiella parvula HOM05D005281 ORTHO05D006351 4.1e-22 109.8 211 42.2
CiPaw.14G059500 Carya illinoinensis HOM05D005281 ORTHO05D006351 5.3e-22 109.4 190 42.6
Haze_24325 Corylus avellana HOM05D005281 ORTHO05D006351 5.3e-22 109.4 188 42.0
MD11G1074600 Malus domestica HOM05D005281 ORTHO05D006351 6.9e-22 109.0 181 41.4
Oeu045534.1 Olea europaea HOM05D005281 ORTHO05D006351 9.0e-22 108.6 190 39.5
BcaB05g22447 Brassica carinata HOM05D005281 ORTHO05D006351 1.2e-21 108.2 246 37.0
Gohir.D07G108000 Gossypium hirsutum HOM05D005281 ORTHO05D006351 1.5e-21 107.8 199 40.2
CAN.G1213.5 Capsicum annuum HOM05D005281 ORTHO05D006351 2.0e-21 107.5 188 42.6
Lj6g0025988 Lotus japonicus HOM05D005281 ORTHO05D006351 2.0e-21 107.5 167 42.5
FAN11G1688 Fragaria x ananassa HOM05D005281 ORTHO05D006351 2.6e-21 107.1 200 43.0
Eucgr.J01912 Eucalyptus grandis HOM05D005281 ORTHO05D006351 4.5e-21 106.3 178 41.0
Gohir.A07G104200 Gossypium hirsutum HOM05D005281 ORTHO05D006351 4.5e-21 106.3 204 39.7
Gorai.001G116100 Gossypium raimondii HOM05D005281 ORTHO05D006351 4.5e-21 106.3 201 39.8
MD03G1070600 Malus domestica HOM05D005281 ORTHO05D006351 4.5e-21 106.3 197 40.6
FvH4_3g38560 Fragaria vesca HOM05D005281 ORTHO05D006351 5.9e-21 105.9 204 42.6
BcaB01g04640 Brassica carinata HOM05D005281 ORTHO05D006351 2.2e-20 104.0 156 46.8
Ca_14931_v3 Cicer arietinum L. HOM05D005281 ORTHO05D006351 2.9e-20 103.6 168 44.0
Medtr3g463770 Medicago truncatula HOM05D005281 ORTHO05D006351 5.0e-20 102.8 173 41.6
Glyma.18G063000 Glycine max HOM05D005281 ORTHO05D006351 6.5e-20 102.4 190 38.9
FAN16G1244 Fragaria x ananassa HOM05D005281 ORTHO05D006351 1.9e-19 100.9 206 39.8
DCAR_007376 Daucus carota HOM05D005281 ORTHO05D006351 5.5e-19 99.4 156 44.2
Lalb_Chr18g0050941 Lupinus albus HOM05D005281 ORTHO05D006351 5.5e-19 99.4 165 43.0
RcHm_v2.0_Chr5g0069461 Rosa chinensis HOM05D005281 ORTHO05D006351 5.5e-19 99.4 208 38.9
Ciclev10028198m.g Citrus clementina HOM05D005281 ORTHO05D006351 1.2e-18 98.2 198 40.4
Atru.chr3.4219 Acer truncatum HOM05D005281 ORTHO05D006351 3.6e-18 96.7 148 46.6
Psat5g159280 Pisum sativum HOM05D005281 ORTHO05D006351 3.6e-18 96.7 199 38.2
VMungo0540G0631 Vigna mungo HOM05D005281 ORTHO05D006351 8.8e-17 92.0 197 37.6
TPR.G21171 Trifolium pratense HOM05D005281 ORTHO05D006351 5.7e-16 89.4 181 37.0
Glyma.11G175400 Glycine max HOM05D005281 ORTHO05D006351 1.3e-15 88.2 153 40.5
TWI31G0978 Tripterygium wilfordii HOM05D005281 ORTHO05D006351 2.8e-15 87.0 204 39.7
SalBow2G0889 Salvia bowleyana HOM05D005281 ORTHO05D006351 4.8e-15 86.3 189 35.4
Duzib150G1450 Durio zibethinus HOM05D005281 ORTHO05D006351 8.2e-15 85.5 157 39.5
Sed0014563 Sechium edule HOM05D005281 ORTHO05D006351 4.1e-14 83.2 183 38.8
Lsat_1_v5_gn_9_20081 Lactuca sativa HOM05D005281 ORTHO05D006351 5.3e-14 82.8 187 39.6
PSO339G3076 Papaver somniferum HOM05D005281 ORTHO05D006351 4.5e-13 79.7 217 34.6
PGR119G1117 Punica granatum HOM05D005281 ORTHO05D006351 1.7e-12 77.8 204 35.3
PSO384G0667 Papaver somniferum HOM05D005281 ORTHO05D006351 2.9e-12 77.0 216 32.9
HanXRQChr08g0229401 Helianthus annuus HOM05D005281 ORTHO05D006351 5.0e-12 76.3 151 39.1
ClCG02G019550 Citrullus lanatus HOM05D005281 ORTHO05D006351 1.1e-11 75.1 183 33.3
arahy.Tifrunner.gnm1.ann1.EQN3LQ Arachis hypogaea HOM05D005281 ORTHO05D006351 4.2e-11 73.2 172 37.8
arahy.Tifrunner.gnm1.ann1.UVB96A Arachis hypogaea HOM05D005281 ORTHO05D006351 9.4e-11 72.0 172 37.2
Aqoxy4G02562 Aquilegia oxysepala HOM05D005281 ORTHO05D006351 1.2e-10 71.6 90 46.7
Peaxi162Scf00025g00089 Petunia axillaris HOM05D005281 ORTHO05D006351 1.2e-10 71.6 187 33.2
Zm00001eb119510 Zea mays HOM05D005281 ORTHO05D006351 1.6e-10 71.2 170 35.3
Os01g0225100 Oryza sativa ssp. japonica HOM05D013050 ORTHO05D013988 2.7e-10 70.5 165 35.8
CsaV3_6G016220 Cucumis sativus L. HOM05D005281 ORTHO05D006351 7.9e-10 68.9 184 31.5
unitig_0.g1157 Utricularia gibba HOM05D005130 ORTHO05D006185 1.5e-08 64.7 190 33.2
HPP92_005265 Vanilla planifolia HOM05D005281 ORTHO05D006351 5.7e-08 62.8 166 30.7
SGA_v2.0_scaffold73G24288 Striga asiatica HOM05D004205 ORTHO05D004977 4.8e-07 59.7 189 28.0
ECA247G0807 Erigeron canadensis HOM05D005281 ORTHO05D006351 6.3e-07 59.3 135 37.0


User provided reference genes

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