Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.1e-183 645.6 331 100.0
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.8e-169 598.2 332 93.1
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.1e-167 592.4 326 92.9
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 2.3e-166 589.0 332 91.0
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 5.2e-166 587.8 326 91.4
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 6.8e-166 587.4 332 89.8
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 2.0e-165 585.9 332 89.5
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 2.6e-165 585.5 332 89.8
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 2.6e-165 585.5 359 85.5
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 9.8e-165 583.6 332 89.2
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 9.8e-165 583.6 332 89.8
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 1.7e-164 582.8 332 88.3
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 4.9e-164 581.3 332 89.5
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 4.9e-164 581.3 325 90.8
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 6.4e-164 580.9 332 88.6
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.8e-163 579.3 332 89.5
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 1.8e-163 579.3 332 88.3
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 2.4e-163 578.9 332 88.3
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 5.4e-163 577.8 333 88.3
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 4.6e-162 574.7 332 88.3
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 4.6e-162 574.7 328 89.3
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 4.6e-162 574.7 331 89.1
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 5.9e-162 574.3 326 88.7
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 5.9e-162 574.3 330 89.1
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 7.8e-162 573.9 333 88.0
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 1.0e-161 573.5 328 88.4
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.7e-161 572.8 326 88.3
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 2.3e-161 572.4 329 88.1
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 3.9e-161 571.6 326 88.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 8.6e-161 570.5 326 88.0
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.9e-160 569.3 325 88.6
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 3.3e-160 568.5 330 87.6
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 7.3e-160 567.4 329 87.8
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 7.3e-160 567.4 332 86.4
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 7.3e-160 567.4 332 87.3
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 9.5e-160 567.0 331 86.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.2e-159 566.6 326 87.7
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 2.1e-159 565.8 335 87.8
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 2.1e-159 565.8 335 87.8
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 3.6e-159 565.1 326 87.4
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 6.2e-159 564.3 326 87.1
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 6.2e-159 564.3 326 88.0
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 1.4e-158 563.1 329 86.9
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.8e-158 562.8 332 85.5
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.3e-158 562.4 326 86.8
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 4.0e-158 561.6 332 85.2
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 6.8e-158 560.8 327 86.2
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.8e-158 560.8 301 96.7
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 8.9e-158 560.5 332 85.8
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 1.2e-157 560.1 326 86.8
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 2.0e-157 559.3 332 84.9
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 9.8e-157 557.0 329 86.0
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 9.8e-157 557.0 329 85.7
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.3e-156 556.6 326 86.2
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.3e-156 556.6 326 86.2
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 2.9e-156 555.4 326 85.9
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.9e-156 555.4 332 85.5
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 8.3e-156 553.9 332 85.2
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 2.4e-155 552.4 332 84.3
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 2.4e-155 552.4 326 86.2
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 5.4e-155 551.2 332 84.9
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 5.4e-155 551.2 328 85.1
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 9.2e-155 550.4 326 85.6
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-154 550.1 332 84.0
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 3.5e-154 548.5 332 83.4
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 1.3e-153 546.6 328 84.8
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.3e-153 546.6 330 82.4
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 1.7e-153 546.2 332 84.0
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 1.7e-153 546.2 332 84.0
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 2.3e-153 545.8 373 78.3
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 2.3e-153 545.8 386 76.2
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.5e-152 543.1 338 82.8
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.9e-152 542.7 328 84.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 1.9e-152 542.7 326 84.4
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.3e-152 542.0 332 84.3
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 7.3e-152 540.8 324 86.1
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 8.1e-151 537.3 329 81.5
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 8.1e-151 537.3 331 81.9
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.1e-150 537.0 330 80.9
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.8e-150 536.2 330 80.9
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 2.3e-150 535.8 331 81.6
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 2.3e-150 535.8 300 90.7
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 8.9e-150 533.9 329 80.9
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 1.5e-149 533.1 331 80.4
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 2.6e-149 532.3 329 80.9
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 7.5e-149 530.8 329 80.2
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 7.5e-149 530.8 329 80.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 7.5e-149 530.8 329 80.5
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 80.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 80.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 80.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 9.8e-149 530.4 329 80.5
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 3.2e-147 525.4 455 64.0
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 2.1e-146 522.7 303 86.5
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 4.6e-146 521.5 329 79.6
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.5e-144 516.5 325 80.3
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.9e-144 516.2 314 82.2
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 9.5e-144 513.8 328 78.7
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 4.7e-143 511.5 338 78.7
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.0e-141 506.1 332 80.4
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 1.3e-140 503.4 326 82.8
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 1.9e-139 499.6 330 77.9
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 7.1e-139 497.7 327 78.3
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 1.2e-138 496.9 330 75.5
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 1.0e-137 493.8 330 76.7
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 1.5e-136 490.0 326 79.1
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 9.6e-136 487.3 330 75.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.2e-135 484.6 376 68.6
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 8.9e-134 480.7 332 76.8
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.3e-132 476.9 327 73.1
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 3.8e-132 475.3 335 77.0
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 8.1e-127 457.6 279 81.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 1.1e-120 437.2 323 73.4
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.2e-116 422.9 233 93.6
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 2.8e-111 406.0 330 60.3
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 4.0e-110 402.1 234 86.3
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 7.6e-109 397.9 318 63.2
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 2.2e-108 396.4 330 62.7
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 1.8e-97 360.1 320 59.7
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 2.5e-96 356.3 274 67.5
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 9.7e-96 354.4 223 80.7
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 1.2e-93 347.4 336 62.2
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 1.0e-92 344.4 240 69.2
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.6e-90 337.0 197 87.8
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 7.7e-85 318.2 335 55.5
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 7.9e-82 308.1 220 75.9
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 4.4e-80 302.4 220 74.1
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 4.4e-80 302.4 167 92.2
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.0e-76 291.2 165 87.3
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 1.1e-75 287.7 333 45.6
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.5e-75 287.3 220 72.3
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 7.0e-70 268.5 165 80.6
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 8.5e-68 261.5 279 58.4
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 1.3e-63 247.7 329 47.7
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-62 244.2 135 87.4
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 3.0e-57 226.5 129 86.8
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 1.3e-44 184.5 103 85.4
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 1.2e-40 171.4 162 55.6
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 1.3e-39 167.9 150 57.3
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.3e-39 167.9 203 52.2
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-37 160.2 92 87.0
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.9e-36 156.4 103 75.7
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 1.1e-35 154.8 87 83.9
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.2e-31 140.6 91 82.4
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.2e-31 140.6 77 89.6
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 4.1e-30 136.3 69 89.9
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 9.2e-30 135.2 88 77.3
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.0e-28 131.7 75 85.3
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 1.1e-27 128.3 80 80.0
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 7.3e-27 125.6 74 85.1
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 9.5e-27 125.2 72 81.9
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 5.8e-24 115.9 72 81.9
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 8.4e-23 112.1 67 83.6
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 3.2e-22 110.2 69 78.3
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 6.6e-20 102.4 65 80.0
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 1.3e-07 61.6 85 47.1
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 2.2e-07 60.8 76 46.1
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 2.2e-07 60.8 33 84.8


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