Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 3.0e-94 348.6 185 100.0
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.2e-88 327.0 191 93.2
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 9.2e-88 327.0 191 93.2
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 1.5e-85 319.7 191 91.6
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.6e-71 271.6 180 85.0
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.5e-49 198.0 130 84.6
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.4e-27 127.1 111 64.9
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 4.1e-27 125.6 115 65.2
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 2.0e-26 123.2 111 67.6
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.2e-25 119.8 110 65.5
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 6.5e-25 118.2 112 65.2
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 7.2e-24 114.8 110 64.5
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 7.2e-24 114.8 102 64.7
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 5.7e-21 105.1 107 59.8
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.8e-20 102.8 110 58.2
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 6.3e-20 101.7 110 58.2
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 8.2e-20 101.3 95 63.2
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.4e-19 99.8 96 62.5
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 2.4e-19 99.8 88 64.8
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.1e-19 99.4 110 55.5
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 2.0e-18 96.7 95 58.9
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 2.0e-18 96.7 111 55.0
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 2.7e-18 96.3 94 60.6
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 4.5e-18 95.5 100 57.0
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 1.3e-17 94.0 137 48.9
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.3e-17 94.0 111 53.2
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 3.8e-17 92.4 111 53.2
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 5.0e-17 92.0 96 56.2
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.9e-16 90.1 141 46.1
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 3.2e-16 89.4 82 61.0
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 4.2e-16 89.0 100 56.0
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 5.5e-16 88.6 111 52.3
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 7.2e-16 88.2 111 53.2
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 7.2e-16 88.2 97 53.6
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 1.6e-15 87.0 111 51.4
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 1.6e-15 87.0 111 51.4
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 1.6e-15 87.0 111 51.4
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 2.1e-15 86.7 111 52.3
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 2.1e-15 86.7 91 60.4
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 4.7e-15 85.5 95 48.4
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 8.0e-15 84.7 86 58.1
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 1.0e-14 84.3 112 48.2
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 1.8e-14 83.6 105 50.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.0e-14 82.8 82 58.5
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 2.0e-13 80.1 101 51.5
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 4.4e-13 79.0 87 55.2
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 9.8e-13 77.8 79 54.4
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.3e-12 77.4 92 53.3
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.3e-12 77.4 92 53.3
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 2.8e-12 76.3 93 50.5
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 3.7e-12 75.9 91 52.7
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 6.3e-12 75.1 77 58.4
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 1.1e-11 74.3 93 51.6
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 5.4e-11 72.0 81 55.6
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 5.4e-11 72.0 84 52.4
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 7.0e-11 71.6 88 52.3
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 9.1e-11 71.2 109 44.0
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 1.2e-10 70.9 87 52.9
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 1.2e-10 70.9 79 59.5
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.2e-10 70.9 89 50.6
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 2.7e-10 69.7 98 41.8
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 2.7e-10 69.7 109 45.0
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 3.5e-10 69.3 88 50.0
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 3.5e-10 69.3 88 54.5
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 3.5e-10 69.3 73 60.3
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 4.5e-10 68.9 96 43.8
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 5.9e-10 68.6 75 60.0
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 7.7e-10 68.2 88 51.1
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 1.3e-09 67.4 90 46.7
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 2.9e-09 66.2 94 45.7
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 2.9e-09 66.2 81 54.3
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 3.8e-09 65.9 88 51.1
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 5.0e-09 65.5 88 50.0
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 6.5e-09 65.1 109 38.5
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 8.6e-09 64.7 104 45.2
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 2.5e-08 63.2 93 41.9
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 3.2e-08 62.8 82 51.2
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 3.2e-08 62.8 86 48.8
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 4.2e-08 62.4 75 49.3
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 4.2e-08 62.4 90 45.6
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 5.5e-08 62.0 86 48.8
Actinidia22381 Actinidia chinensis HOM05D006591 ORTHO05D007861 7.2e-08 61.6 48 70.8
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 7.2e-08 61.6 88 47.7
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 7.2e-08 61.6 68 52.9
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 7.2e-08 61.6 75 52.0
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 1.2e-07 60.8 63 58.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.6e-07 60.5 111 41.4
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 2.1e-07 60.1 111 41.4
CAN.G1340.10 Capsicum annuum HOM05D006591 ORTHO05D007861 2.8e-07 59.7 44 72.7
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 2.8e-07 59.7 86 40.7
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.8e-07 59.7 60 60.0
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 2.8e-07 59.7 111 40.5
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 4.7e-07 58.9 85 48.2
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 6.1e-07 58.5 88 44.3
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 6.1e-07 58.5 89 43.8
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 8.0e-07 58.2 68 51.5
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 1.0e-06 57.8 88 44.3
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 1.8e-06 57.0 83 48.2
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.8e-06 57.0 88 46.6
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 1.8e-06 57.0 108 40.7
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.8e-06 57.0 85 48.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 2.3e-06 56.6 69 55.1
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 3.0e-06 56.2 84 46.4
MBI18_g32376_MAGBIO Magnolia biondii HOM05D006591 ORTHO05D007861 8.8e-06 54.7 51 54.9


User provided reference genes

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