Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 9.4e-49 196.4 92 100.0
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.1e-36 156.4 76 94.7
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 5.5e-33 144.1 68 91.2
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.7e-32 141.0 71 88.7
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 4.7e-32 141.0 68 88.2
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 4.7e-32 141.0 67 89.6
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 88.2
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 89.7
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 89.7
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 89.7
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 6.1e-32 140.6 71 85.9
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 88.2
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 88.2
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 6.1e-32 140.6 68 88.2
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 8.0e-32 140.2 68 86.8
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 8.0e-32 140.2 67 89.6
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 8.0e-32 140.2 68 88.2
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 1.0e-31 139.8 68 86.8
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 1.4e-31 139.4 67 89.6
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.8e-31 139.0 66 89.4
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.8e-31 139.0 66 89.4
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 1.8e-31 139.0 66 89.4
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 1.8e-31 139.0 68 88.2
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 4.0e-31 137.9 68 88.2
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 5.2e-31 137.5 67 88.1
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 8.8e-31 136.7 80 73.8
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 8.8e-31 136.7 68 86.8
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 8.8e-31 136.7 68 88.2
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 1.2e-30 136.3 68 86.8
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 2.0e-30 135.6 64 89.1
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 2.6e-30 135.2 68 85.3
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 2.6e-30 135.2 68 85.3
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 4.4e-30 134.4 63 90.5
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 4.4e-30 134.4 67 86.6
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 1.3e-29 132.9 68 85.3
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 1.3e-29 132.9 68 86.8
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 1.3e-29 132.9 68 82.4
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.3e-29 132.9 63 90.5
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.7e-29 132.5 68 82.4
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 2.2e-29 132.1 67 83.6
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 2.8e-29 131.7 64 87.5
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 3.7e-29 131.3 68 83.8
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 3.7e-29 131.3 64 85.9
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 3.7e-29 131.3 67 85.1
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 6.3e-29 130.6 63 87.3
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 6.3e-29 130.6 63 87.3
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 8.2e-29 130.2 64 84.4
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 1.1e-28 129.8 68 82.4
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 1.1e-28 129.8 68 82.4
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.4e-28 129.4 67 83.6
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.8e-28 129.0 69 81.2
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 1.8e-28 129.0 63 85.7
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.1e-28 128.3 60 90.0
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 4.1e-28 127.9 65 83.1
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 4.1e-28 127.9 65 83.1
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 5.3e-28 127.5 64 84.4
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 5.3e-28 127.5 69 81.2
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 7.0e-28 127.1 68 80.9
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 7.0e-28 127.1 68 79.4
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 7.0e-28 127.1 69 79.7
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 7.0e-28 127.1 69 79.7
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 7.0e-28 127.1 67 80.6
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 9.1e-28 126.7 69 79.7
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 1.2e-27 126.3 75 76.0
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 1.6e-27 125.9 68 80.9
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 1.6e-27 125.9 67 82.1
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 1.6e-27 125.9 67 82.1
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 2.0e-27 125.6 67 79.1
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 2.0e-27 125.6 69 78.3
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 2.0e-27 125.6 68 79.4
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 2.0e-27 125.6 80 73.8
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 2.0e-27 125.6 67 79.1
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 5.9e-27 124.0 68 77.9
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 7.7e-27 123.6 68 82.4
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.0e-26 123.2 71 76.1
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 1.0e-26 123.2 68 80.9
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 1.0e-26 123.2 68 76.5
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 1.0e-26 123.2 68 76.5
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 1.0e-26 123.2 68 76.5
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 1.0e-26 123.2 68 76.5
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 1.3e-26 122.9 68 79.4
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.3e-26 122.9 67 82.1
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.7e-26 122.5 68 79.4
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 2.2e-26 122.1 61 80.3
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 2.2e-26 122.1 63 82.5
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 5.0e-26 120.9 65 76.9
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 1.2e-24 116.3 67 76.1
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.6e-24 115.9 69 72.5
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.1e-24 115.5 69 76.8
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.6e-24 114.8 75 72.0
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.7e-21 104.8 75 66.7
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.4e-20 102.8 67 71.6
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.0e-18 94.4 48 93.8
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.2e-17 91.7 48 89.6
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 5.7e-14 80.9 37 97.3
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 2.7e-11 72.0 53 58.5
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 2.9e-10 68.6 41 78.0
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.9e-10 68.6 33 78.8
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 1.9e-09 65.9 31 80.6
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 9.5e-09 63.5 40 72.5
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 3.0e-07 58.5 41 61.0
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 3.4e-06 55.1 59 40.7
CSS0039373 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D110895 7.5e-06 53.9 27 96.3


User provided reference genes

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