Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029966 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-116 421.8 197 100.0
CSS0027817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-47 194.1 167 61.7
CSS0029482 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-46 189.1 161 62.7
CSS0001250 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.5e-46 188.3 101 90.1
CSS0024170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.5e-46 188.3 101 90.1
CSS0039193 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.5e-46 188.3 101 90.1
CSS0010335 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.1e-46 188.0 119 76.5
CSS0000858 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-46 187.6 172 59.3
CSS0007796 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-46 187.6 172 59.3
CSS0037461 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-46 187.6 172 59.3
CSS0038170 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-46 187.6 172 59.3
CSS0022055 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-45 184.5 172 58.7
CSS0033236 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-44 184.1 172 58.7
CSS0001169 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.8e-44 183.3 101 87.1
CSS0004866 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-44 182.2 119 77.3
CSS0011005 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0017883 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-44 182.2 119 77.3
CSS0032452 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0038278 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0041031 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0048989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0050398 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-44 182.2 119 77.3
CSS0017511 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.5e-43 180.3 119 76.5
CSS0000519 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-42 176.8 119 74.8
SHI23105 Sapria himalayana HOM05D000002 ORTHO05D000047 1.6e-42 176.8 145 64.8
CSS0004984 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-41 174.1 119 73.9
CSS0008463 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.5e-40 168.7 119 73.1
Hma1.2p1_1043F.1_g251210 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.0e-39 165.2 118 72.9
SHI48864 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-37 158.7 121 66.1
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.0e-31 141.0 123 61.0
GSVIVG01038208001 Vitis vinifera HOM05D000002 ORTHO05D000047 1.3e-26 124.0 101 60.4
Hma1.2p1_1513F.1_g288010 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.0e-20 104.4 118 47.5
Hma1.2p1_1549F.1_g290080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.7e-20 101.7 152 40.1
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.4e-19 98.2 105 48.6
Hma1.2p1_0744F.1_g211780 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-18 97.1 125 43.2
Hma1.2p1_1349F.1_g277350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-18 95.9 91 53.8
Hma1.2p1_3882F.1_g337890 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.2e-18 94.7 113 46.9
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-17 94.4 115 44.3
Nn2g11309 Nelumbo nucifera HOM05D000002 ORTHO05D000047 2.4e-17 93.2 109 45.9
Hma1.2p1_0004F.1_g004100 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-17 92.8 91 48.4
Hma1.2p1_0270F.1_g108600 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.1e-17 92.4 98 49.0
Nn7g38028 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.3e-17 92.0 94 47.9
Hma1.2p1_1551F.1_g290170 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-17 91.7 123 41.5
Nn5g30897 Nelumbo nucifera HOM05D000002 ORTHO05D000047 7.0e-17 91.7 94 46.8
Hma1.2p1_0164F.1_g073240 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.0e-16 90.1 115 43.5
Hma1.2p1_2309F.1_g319500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-16 89.7 114 43.0
Hma1.2p1_0503F.1_g168050 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.5e-16 89.4 102 47.1
Hma1.2p1_0183F.1_g081030 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.9e-16 88.6 103 45.6
Hma1.2p1_0062F.1_g034270 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-15 87.0 111 43.2
Hma1.2p1_1821F.1_g304210 Hydrangea macrophylla HOM05D000398 ORTHO05D002677 1.7e-15 87.0 103 51.5
Hma1.2p1_0018F.1_g013420 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-15 86.7 106 45.3
Hma1.2p1_0868F.1_g230500 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.2e-15 86.7 111 45.0
Hma1.2p1_0706F.1_g207010 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.9e-15 86.3 92 46.7
Hma1.2p1_0074F.1_g038980 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-15 85.1 52 59.6
Hma1.2p1_0232F.1_g097650 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-15 85.1 45 66.7
Hma1.2p1_1113F.1_g258670 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.5e-15 85.1 62 61.3
Hma1.2p1_0628F.1_g191990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.5e-14 84.0 61 63.9
Hma1.2p1_0722F.1_g208760 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-14 83.6 59 64.4
Hma1.2p1_0217F.1_g091730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.2e-14 82.4 59 62.7
Hma1.2p1_0526F.1_g172830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.2e-14 82.4 129 38.8
Oeu052091.1 Olea europaea HOM05D000002 ORTHO05D000001 7.2e-14 81.6 104 39.4
Atru.chr3.1979 Acer truncatum HOM05D000002 ORTHO05D000047 1.2e-13 80.9 125 39.2
Hma1.2p1_0036F.1_g023540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.7e-13 79.7 63 57.1
Nn5g30282 Nelumbo nucifera HOM05D000002 ORTHO05D000047 3.6e-13 79.3 42 66.7
Hma1.2p1_0072F.1_g038350 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-13 79.0 61 59.0
Hma1.2p1_0247F.1_g101820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.7e-13 79.0 56 53.6
Nn1g04145 Nelumbo nucifera HOM05D000002 ORTHO05D000047 1.0e-12 77.8 76 47.4
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 1.4e-12 77.4 116 37.1
CANSAT25G0968 Cannabis sativa HOM05D000002 ORTHO05D000047 8.8e-12 74.7 119 41.2
Hma1.2p1_0528F.1_g173080 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.8e-12 74.7 50 66.0
Hma1.2p1_0589F.1_g184740 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 2.0e-11 73.6 86 45.3
Cpa.g.sc3.386 Carica papaya HOM05D000002 ORTHO05D000047 3.3e-11 72.8 37 70.3
Hma1.2p1_0316F.1_g123090 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-11 72.8 56 58.9
Hma1.2p1_0450F.1_g155525 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-11 72.8 68 50.0
Hma1.2p1_0450F.1_g155530 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-11 72.8 68 50.0
Hma1.2p1_0450F.1_g155540 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-11 72.8 68 50.0
Hma1.2p1_0450F.1_g155545 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.3e-11 72.8 68 50.0
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.4e-11 72.4 98 42.9
CANSAT54G2576 Cannabis sativa HOM05D000002 ORTHO05D000047 5.7e-11 72.0 92 40.2
Hma1.2p1_0530F.1_g173310 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.4e-11 71.6 35 71.4
Hma1.2p1_0668F.1_g199811 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.4e-11 71.6 89 43.8
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.7e-11 71.2 88 43.2
Hma1.2p1_0378F.1_g139783 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.7e-11 71.2 60 53.3
Hma1.2p1_0668F.1_g199820 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.7e-11 71.2 60 53.3
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.7e-10 70.5 88 43.2
Hma1.2p1_0062F.1_g034230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.7e-10 70.5 81 48.1
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.2e-10 70.1 84 46.4
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.2e-10 70.1 88 42.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-10 70.1 76 44.7
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 2.2e-10 70.1 51 47.1
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-10 69.7 88 42.0
Hma1.2p1_0210F.1_g089480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.8e-10 69.7 96 40.6
Hma1.2p1_0172F.1_g076300 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.7e-10 69.3 73 53.4
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 6.3e-10 68.6 71 47.9
Hma1.2p1_0077F.1_g039800 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.3e-10 68.6 48 58.3
Hma1.2p1_1694F.1_g298020 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.2e-10 68.2 45 60.0
SHI20908 Sapria himalayana HOM05D000023 ORTHO05D000014 8.2e-10 68.2 55 50.9
Cpa.g.sc29.59 Carica papaya HOM05D000002 ORTHO05D000047 1.1e-09 67.8 66 50.0
Atru.chr3.1554 Acer truncatum HOM05D000002 ORTHO05D000047 2.4e-09 66.6 95 41.1
SHI14617 Sapria himalayana HOM05D000002 ORTHO05D000047 2.4e-09 66.6 105 36.2
SHI26944 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-09 66.2 35 65.7
Cpa.g.sc133.6 Carica papaya HOM05D000002 ORTHO05D000047 4.1e-09 65.9 64 50.0
Cpa.g.sc15.70 Carica papaya HOM05D000002 ORTHO05D000047 4.1e-09 65.9 37 62.2
Hma1.2p1_0172F.1_g076320 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-09 65.5 48 56.2
Cpa.g.sc12.143 Carica papaya HOM05D000002 ORTHO05D000047 7.0e-09 65.1 37 62.2
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.0e-09 65.1 41 61.0
Ca_02873_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 9.1e-09 64.7 99 36.4
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-08 64.3 62 48.4
Cpa.g.sc25.53 Carica papaya HOM05D000002 ORTHO05D000047 1.6e-08 63.9 33 66.7
Cpa.g.sc176.9 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-08 63.2 49 53.1
Cpa.g.sc58.26 Carica papaya HOM05D000002 ORTHO05D000047 2.6e-08 63.2 37 59.5
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 2.6e-08 63.2 41 58.5
Cpa.g.sc5.346 Carica papaya HOM05D000002 ORTHO05D000047 1.3e-07 60.8 49 49.0
Oeu044270.1 Olea europaea HOM05D000002 ORTHO05D000047 1.3e-07 60.8 33 69.7
Cpa.g.sc122.32 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-07 60.5 37 56.8
Cpa.g.sc24.57 Carica papaya HOM05D000002 ORTHO05D000047 1.7e-07 60.5 49 53.1
Cpa.g.sc28.123 Carica papaya HOM05D000207 ORTHO05D000047 1.7e-07 60.5 46 50.0
Ca_11532_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.7e-07 60.5 87 40.2
Cpa.g.sc15.92 Carica papaya HOM05D001549 ORTHO05D003098 2.2e-07 60.1 51 47.1
CSS0048452 Camellia sinensis var. sinensis HOM05D055299 ORTHO05D000047 5.0e-07 58.9 45 71.1
Cpa.g.sc59.53 Carica papaya HOM05D000002 ORTHO05D000047 5.0e-07 58.9 50 52.0
Nn1g06938 Nelumbo nucifera HOM05D000002 ORTHO05D000047 5.0e-07 58.9 98 32.7
CSS0050382 Camellia sinensis var. sinensis HOM05D055299 ORTHO05D000047 8.5e-07 58.2 32 93.8
Cpa.g.sc11.149 Carica papaya HOM05D000002 ORTHO05D000047 1.5e-06 57.4 71 39.4
Cpa.g.sc118.22 Carica papaya HOM05D000002 ORTHO05D000047 1.9e-06 57.0 34 58.8
SHI07599 Sapria himalayana HOM05D000002 ORTHO05D000047 2.5e-06 56.6 50 44.0
Cpa.g.sc20.131 Carica papaya HOM05D004423 ORTHO05D000047 3.2e-06 56.2 98 36.7
Cpa.g.sc30.23 Carica papaya HOM05D000002 ORTHO05D000047 4.2e-06 55.8 34 55.9
Medtr1262s0010 Medicago truncatula HOM05D000002 ORTHO05D000047 4.2e-06 55.8 115 36.5
Cpa.g.sc21.143 Carica papaya HOM05D000002 ORTHO05D000047 7.2e-06 55.1 37 54.1
ClCG11G008610 Citrullus lanatus HOM05D000002 ORTHO05D000001 7.2e-06 55.1 62 32.3
Hma1.2p1_0734F.1_g210330 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-06 55.1 53 45.3
Hma1.2p1_1555F.1_g290480 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 7.2e-06 55.1 60 45.0


User provided reference genes

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