Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 1.5e-239 832.4 407 100.0
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 2.3e-208 728.8 407 87.5
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 4.0e-200 701.4 407 84.0
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 2.8e-198 695.3 395 87.1
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 4.4e-191 671.4 406 79.8
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 5.7e-191 671.0 378 85.4
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.8e-190 668.7 407 80.3
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 3.5e-188 661.8 407 79.9
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 1.7e-187 659.4 407 79.4
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 3.8e-187 658.3 407 80.1
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.1e-186 656.8 348 91.7
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 2.1e-185 652.5 399 80.2
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 2.1e-185 652.5 407 77.9
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 1.0e-184 650.2 407 78.6
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 2.3e-184 649.0 378 83.9
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 4.0e-184 648.3 408 77.9
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 4.0e-184 648.3 378 81.7
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 5.2e-184 647.9 382 81.9
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 5.2e-184 647.9 366 84.4
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 1.2e-183 646.7 388 80.4
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 3.4e-183 645.2 348 88.5
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 5.8e-183 644.4 366 84.4
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 5.8e-183 644.4 367 82.3
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 7.5e-183 644.0 366 83.3
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 9.8e-183 643.7 408 77.5
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 4.1e-181 638.3 384 81.0
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 4.1e-181 638.3 362 85.6
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 7.0e-181 637.5 367 84.5
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 7.0e-181 637.5 430 74.2
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 1.2e-180 636.7 364 83.0
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.6e-180 636.3 385 80.0
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.6e-180 636.3 384 80.2
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.7e-180 635.6 407 77.1
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 4.6e-180 634.8 378 79.9
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 4.6e-180 634.8 362 84.5
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 7.8e-180 634.0 347 86.5
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.0e-179 633.6 348 86.2
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 2.3e-179 632.5 382 80.6
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 5.0e-179 631.3 400 78.0
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 1.1e-178 630.2 378 80.2
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 1.1e-178 630.2 366 82.5
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.5e-178 629.8 372 81.5
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.5e-178 629.8 380 80.8
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 2.5e-178 629.0 407 76.9
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 4.3e-178 628.2 407 76.7
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 1.2e-177 626.7 404 75.5
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.2e-177 626.7 372 82.0
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 3.6e-177 625.2 378 79.1
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 3.6e-177 625.2 382 79.6
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 4.7e-177 624.8 383 79.6
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 8.0e-177 624.0 461 69.6
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.8e-176 622.9 374 81.3
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 3.1e-176 622.1 407 76.2
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 5.2e-176 621.3 374 81.3
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.0e-175 619.4 381 79.0
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 2.6e-175 619.0 382 79.3
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 4.4e-175 618.2 384 78.4
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.3e-174 616.7 409 74.3
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.2e-174 615.9 345 86.1
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 8.3e-174 614.0 345 86.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 3.2e-173 612.1 402 77.9
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.2e-173 612.1 345 85.8
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 3.2e-173 612.1 380 79.5
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 4.1e-173 611.7 345 85.5
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 6.0e-172 607.8 348 83.9
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.0e-171 607.1 407 72.5
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.0e-171 607.1 345 85.2
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.3e-171 606.7 393 76.3
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 8.6e-171 604.0 408 72.3
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.1e-170 603.6 407 72.5
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 7.3e-170 600.9 372 76.6
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 1.2e-169 600.1 359 80.5
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.6e-169 599.7 368 79.9
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 2.8e-169 599.0 358 81.0
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.8e-169 599.0 381 76.9
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 3.6e-169 598.6 407 71.5
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 4.7e-169 598.2 358 80.7
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 4.7e-169 598.2 365 79.7
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 6.2e-169 597.8 353 81.9
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.1e-168 597.0 350 81.4
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.3e-168 595.9 327 86.9
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 2.3e-168 595.9 337 83.7
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 4.0e-168 595.1 353 81.0
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 3.4e-167 592.0 353 81.0
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 4.4e-167 591.7 351 80.9
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 4.4e-167 591.7 359 80.2
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 6.4e-166 587.8 357 78.4
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.2e-164 583.6 319 86.8
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.2e-164 583.6 352 77.8
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.0e-164 581.3 332 82.8
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 6.0e-164 581.3 332 83.1
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 3.0e-163 578.9 345 79.4
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.6e-163 577.8 332 81.9
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 5.6e-162 574.7 413 71.2
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 7.3e-162 574.3 371 73.9
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.1e-160 570.5 350 76.9
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 2.9e-158 562.4 344 77.6
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 5.6e-154 548.1 335 79.7
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 4.0e-152 542.0 346 76.6
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 1.8e-144 516.5 358 70.4
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.3e-142 510.4 381 68.2
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 1.7e-142 510.0 387 67.2
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 2.9e-142 509.2 354 68.9
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 1.9e-141 506.5 335 71.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 9.3e-141 504.2 330 71.2
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.6e-140 503.4 378 66.9
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 7.6e-135 484.6 333 67.9
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.9e-130 469.9 294 78.6
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.5e-127 458.8 407 59.5
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 9.0e-120 434.5 329 61.7
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 9.4e-117 424.5 270 76.3
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.4e-115 420.6 293 70.0
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.1e-114 417.5 398 54.5
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 1.4e-112 410.6 295 69.2
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 5.3e-112 408.7 341 57.8
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.7e-110 403.7 263 76.0
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 3.8e-102 375.9 327 57.5
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 2.2e-94 350.1 369 48.5
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 8.6e-70 268.5 215 64.2
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 5.6e-69 265.8 287 46.0
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 2.0e-66 257.3 190 69.5
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 2.8e-60 236.9 168 66.7
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 2.3e-51 207.2 169 63.9
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.6e-47 194.5 131 72.5
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 4.6e-15 86.7 59 76.3
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.9e-13 81.3 90 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.9e-13 81.3 90 48.9
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 1.4e-08 65.1 35 80.0


User provided reference genes

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