Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 3.2e-267 924.5 451 100.0
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 7.6e-261 903.3 451 96.7
CSS0027577 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 4.6e-173 611.7 463 70.4
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 3.0e-71 273.5 430 40.5
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 1.2e-69 268.1 413 39.2
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 5.8e-67 259.2 460 37.8
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 2.0e-59 234.2 434 35.5
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 2.5e-14 84.3 261 27.6
Rhsim11G0054100 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.2e-13 81.3 295 28.1
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 6.3e-13 79.7 418 24.9
Rhsim06G0012900 Rhododendron simsii HOM05D011274 ORTHO05D012136 4.1e-12 77.0 245 26.5
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 6.9e-12 76.3 368 24.5
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 9.0e-12 75.9 308 26.6
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 9.0e-12 75.9 324 25.6
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.9e-11 73.2 292 25.7
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.9e-11 73.2 324 24.1
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 7.7e-11 72.8 252 25.4
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 5.0e-10 70.1 252 25.0
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 6.5e-10 69.7 198 30.8
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 1.4e-09 68.6 250 25.2
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 1.9e-09 68.2 253 24.9
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.5e-09 66.6 283 25.1
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.5e-09 66.6 300 25.3
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.6e-08 63.9 292 25.0
Rhsim06G0014500 Rhododendron simsii HOM05D000059 ORTHO05D012136 4.6e-08 63.5 241 24.9
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 8.8e-07 59.3 256 24.6
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 8.8e-07 59.3 295 24.4
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 1.5e-06 58.5 217 26.7
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 5.7e-06 56.6 215 28.4


User provided reference genes

Program Settings