Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.5e-125 452.2 244 100.0
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.8e-124 448.7 244 99.2
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.6e-100 369.8 244 82.4
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.8e-100 369.0 244 80.7
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 6.0e-95 351.3 243 77.4
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.0e-94 350.5 241 79.7
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.5e-93 346.7 238 79.0
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.1e-92 342.8 246 77.6
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 8.2e-92 340.9 244 75.8
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 1.1e-91 340.5 240 76.7
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.4e-91 339.3 245 75.5
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.9e-91 337.8 241 77.6
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.9e-91 337.8 241 76.8
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.9e-91 337.8 241 76.8
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 1.5e-90 336.7 240 76.7
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.5e-90 335.1 250 74.8
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 5.8e-90 334.7 245 73.5
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 1.0e-89 334.0 241 74.7
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.3e-89 333.6 237 73.4
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.7e-89 333.2 241 75.9
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 2.2e-89 332.8 245 73.1
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 8.4e-89 330.9 234 76.1
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.9e-88 329.7 240 74.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 1.9e-88 329.7 245 73.5
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.2e-88 328.9 231 75.8
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 7.1e-88 327.8 246 70.7
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 9.3e-88 327.4 245 74.7
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 3.5e-87 325.5 245 74.3
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.0e-86 323.9 212 78.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 1.8e-86 323.2 247 73.7
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 3.0e-86 322.4 244 71.7
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 3.0e-86 322.4 245 72.2
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 8.7e-86 320.9 212 78.3
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 8.7e-86 320.9 245 73.5
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 1.1e-85 320.5 220 77.7
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.1e-85 320.5 243 73.7
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.9e-85 319.7 234 73.9
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 1.9e-85 319.7 245 75.1
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 5.7e-85 318.2 207 80.7
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 7.4e-85 317.8 245 69.0
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 1.3e-84 317.0 221 73.8
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.6e-84 316.6 244 72.5
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 2.2e-84 316.2 204 82.4
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 6.3e-84 314.7 242 69.0
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.1e-83 313.9 244 69.7
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.4e-83 313.5 247 67.6
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 3.1e-83 312.4 241 71.4
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.2e-82 310.5 231 71.4
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.5e-82 310.1 224 71.4
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 2.6e-82 309.3 214 74.3
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.4e-82 308.9 247 66.8
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 4.5e-82 308.5 240 71.2
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 4.5e-82 308.5 208 75.5
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.0e-81 307.4 237 70.5
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.3e-81 307.0 223 72.6
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 2.9e-81 305.8 222 76.1
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.1e-80 303.9 246 69.1
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.4e-80 303.5 253 68.8
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.4e-80 303.5 208 76.4
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 1.4e-80 303.5 247 66.0
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.2e-80 302.4 247 65.6
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 4.2e-80 302.0 240 68.3
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 1.6e-79 300.1 247 64.0
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 2.1e-79 299.7 214 72.9
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 2.7e-79 299.3 246 64.6
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 1.0e-78 297.4 246 67.5
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 214 72.0
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 245 64.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 3.0e-78 295.8 247 65.2
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 6.7e-78 294.7 225 71.6
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 6.7e-78 294.7 245 64.1
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 8.8e-78 294.3 237 67.5
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 8.8e-78 294.3 214 71.0
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.9e-77 293.1 214 71.0
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 2.5e-77 292.7 213 71.4
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 2.5e-77 292.7 213 71.4
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 2.5e-77 292.7 248 64.5
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.3e-77 292.4 214 69.6
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 4.3e-77 292.0 214 71.0
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 4.3e-77 292.0 214 70.6
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 7.4e-77 291.2 207 72.0
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.7e-76 288.9 225 70.2
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 2.4e-75 286.2 229 67.2
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 9.1e-75 284.3 235 65.1
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 2.0e-74 283.1 251 63.7
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.7e-73 280.0 249 62.7
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 2.9e-73 279.3 237 64.6
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.4e-72 276.9 214 66.4
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 3.2e-72 275.8 234 64.5
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.6e-71 273.5 233 64.8
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 7.9e-71 271.2 213 65.7
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.4e-70 270.4 234 62.4
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.7e-68 263.5 174 78.7
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 9.1e-67 257.7 169 78.7
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 4.2e-64 248.8 220 59.5
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 6.1e-63 245.0 212 60.8
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 6.3e-60 235.0 246 60.6
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 7.7e-58 228.0 232 52.6
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.1e-55 219.9 206 56.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 1.0e-49 201.1 227 49.3
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 8.3e-44 181.4 157 66.2
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 1.6e-42 177.2 150 66.7
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 2.3e-38 163.3 236 44.5
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.2e-36 156.8 99 86.9
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 4.5e-34 149.1 121 70.2
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 2.9e-28 129.8 115 65.2
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 2.7e-26 123.2 247 36.8
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.9e-25 119.4 79 81.0
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 3.5e-18 96.3 209 34.4
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 4.0e-14 82.8 156 34.6
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-11 74.7 51 74.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.2e-10 71.2 52 71.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 6.6e-09 65.5 46 73.9


User provided reference genes

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