Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029947 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.7e-118 427.9 228 100.0
CSS0018430 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.2e-48 195.3 247 50.2
CSS0024446 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 8.8e-40 167.9 239 44.4
CSS0019089 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 7.5e-39 164.9 210 49.0
CSS0039307 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.5e-39 164.9 269 40.5
CSS0036689 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.0e-35 154.5 202 48.5
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 5.5e-34 148.7 154 57.8
CSS0048981 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.0e-32 142.5 194 48.5
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 5.2e-32 142.1 169 51.5
CSS0002710 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.8e-32 141.7 183 49.7
CSS0010354 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.0e-31 140.2 270 38.1
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 2.0e-31 140.2 110 67.3
CSS0006192 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.3e-30 134.8 212 44.3
CSS0030144 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.4e-29 133.3 213 42.3
CSS0038897 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-29 132.9 213 42.3
CSS0022157 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D012079 7.0e-29 131.7 204 42.6
CSS0026511 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-28 129.4 213 41.3
CSS0039815 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.5e-28 129.4 183 45.9
CSS0007861 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.8e-28 128.3 213 41.3
CSS0032039 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 7.8e-28 128.3 200 43.5
CSS0022512 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.0e-27 127.9 252 37.3
CSS0010281 Camellia sinensis var. sinensis HOM05D000084 ORTHO05D012079 3.9e-27 125.9 176 46.0
CSS0009117 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.1e-26 124.4 204 40.2
CSS0041871 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-26 124.4 195 42.6
CSS0043832 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.3e-22 110.9 209 42.1
CSS0016236 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 5.4e-21 105.5 205 42.0
CSS0036809 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 9.2e-21 104.8 170 44.7
CSS0008160 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 1.2e-20 104.4 205 41.5
CSS0044774 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.0e-20 102.1 168 43.5
CSS0042827 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 2.1e-17 93.6 203 39.9
CSS0004175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.2e-17 92.0 203 39.4
CSS0029205 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 6.2e-17 92.0 203 39.4
CSS0012242 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-13 80.5 63 68.3
CSS0045535 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D110565 2.1e-12 77.0 81 48.1
CSS0027775 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.6e-12 75.9 83 47.0
CSS0004472 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.3e-10 69.3 53 64.2
CSS0022707 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-08 64.7 71 47.9
CSS0039633 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D012079 4.0e-08 62.8 70 47.1
vmacro21906 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 1.5e-07 60.8 110 34.5
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 2.0e-07 60.5 70 51.4
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.0e-07 60.5 77 45.5
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 3.4e-07 59.7 128 30.5
Actinidia04037 Actinidia chinensis HOM05D000004 ORTHO05D000034 4.4e-07 59.3 93 34.4
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 5.8e-07 58.9 86 38.4
Manes.12G054904 Manihot esculenta HOM05D000004 ORTHO05D000034 9.9e-07 58.2 123 36.6
Manes.07G081133 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 57.8 110 30.0
Manes.02G214360 Manihot esculenta HOM05D000004 ORTHO05D000034 2.9e-06 56.6 110 29.1
Manes.18G145815 Manihot esculenta HOM05D000004 ORTHO05D000034 2.9e-06 56.6 110 30.0
QL02p050943 Quercus lobata HOM05D000004 ORTHO05D000002 3.7e-06 56.2 105 34.3
ClCG10G007890 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.9e-06 55.8 115 33.0
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 4.9e-06 55.8 104 34.6
AUR62001774 Chenopodium quinoa HOM05D000659 ORTHO05D000505 8.4e-06 55.1 112 29.5


User provided reference genes

Program Settings