Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.8e-226 788.9 394 100.0
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.3e-163 580.1 398 76.9
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.0e-107 394.4 359 60.4
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.3e-101 372.1 376 55.6
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 5.7e-95 352.1 371 53.4
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.2e-37 159.8 247 39.3
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 3.7e-25 120.2 137 47.4
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 4.8e-25 119.8 242 33.5
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 3.2e-21 107.1 254 32.3
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.3e-21 105.5 163 38.0
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.7e-20 104.0 80 65.0
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 3.5e-20 103.6 118 44.9
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.7e-17 93.6 209 29.7
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.4e-16 91.7 68 60.3
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 1.8e-16 91.3 266 26.3
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.9e-16 89.4 322 27.3
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 2.0e-15 87.8 114 39.5
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 1.3e-14 85.1 132 35.6
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 1.3e-14 85.1 197 30.5
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.7e-14 84.7 122 40.2
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.5e-14 82.8 354 21.5
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 8.4e-14 82.4 334 27.2
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 8.4e-14 82.4 229 27.9
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.4e-14 82.4 354 22.0
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.1e-13 82.0 229 27.1
Gohir.A06G194460 Gossypium hirsutum HOM05D000003 ORTHO05D015081 1.9e-13 81.3 206 28.6
CSS0042955 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D009356 2.5e-13 80.9 226 27.9
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 4.2e-13 80.1 88 44.3
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 7.1e-13 79.3 78 44.9
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 9.3e-13 79.0 116 44.8
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-12 78.6 114 47.4
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.2e-12 78.6 82 47.6
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 2.1e-12 77.8 97 44.3
Phvul.007G098300 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.7e-12 77.4 225 27.6
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 4.6e-12 76.6 89 37.1
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.1e-11 73.2 123 39.8
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-10 72.0 157 31.2
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.5e-10 70.9 102 39.2
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.3e-10 70.1 148 33.1
Lsat_1_v5_gn_5_153820 Lactuca sativa HOM05D003915 ORTHO05D005386 4.3e-10 70.1 235 23.0
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 7.4e-10 69.3 149 36.2
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 7.4e-10 69.3 241 25.3
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.7e-10 68.9 151 32.5
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 1.3e-09 68.6 100 36.0
Gohir.A08G172175 Gossypium hirsutum HOM05D000003 ORTHO05D015081 1.3e-09 68.6 165 29.7
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-09 68.6 78 38.5
Rhsim03G0015400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-09 68.6 113 32.7
COL.COLO4_36434 Corchorus olitorius HOM05D008263 ORTHO05D009583 1.6e-09 68.2 193 26.9
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.6e-09 68.2 206 27.2
Rhsim10G0184600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-09 67.4 78 38.5
RhsimUnG0052900 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-09 67.4 78 38.5
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 2.8e-09 67.4 145 31.0
Rhsim10G0189500 Rhododendron simsii HOM05D019536 ORTHO05D011057 3.7e-09 67.0 111 34.2
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 8.2e-09 65.9 173 27.2
Phvul.010G051400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.2e-09 65.9 189 25.9
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 8.2e-09 65.9 238 25.2
Phvul.008G166100 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-08 65.5 258 26.0
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-08 65.5 255 27.5
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.4e-08 65.1 79 39.2
Phvul.002G139600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-08 65.1 253 25.3
Lsat_1_v5_gn_4_170561 Lactuca sativa HOM05D002777 ORTHO05D001516 1.8e-08 64.7 102 32.4
Lj5g0001897 Lotus japonicus HOM05D002777 ORTHO05D001516 1.8e-08 64.7 285 23.2
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.8e-08 64.7 98 35.7
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.1e-08 63.9 139 34.5
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 4.1e-08 63.5 272 25.0
Sed0010987 Sechium edule HOM05D003264 ORTHO05D003276 4.1e-08 63.5 94 38.3
Phvul.001G118500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.3e-08 63.2 188 26.6
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.9e-08 62.8 244 24.6
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.9e-08 62.8 65 41.5
EL10Ac5g11650 Beta vulgaris HOM05D008976 ORTHO05D011121 1.2e-07 62.0 100 30.0
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.0e-07 61.2 128 28.9
Gorai.009G210200 Gossypium raimondii HOM05D038512 ORTHO05D015081 2.0e-07 61.2 100 39.0
Medtr5g055560 Medicago truncatula HOM05D002777 ORTHO05D001516 2.0e-07 61.2 238 26.9
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 2.6e-07 60.8 116 32.8
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 2.6e-07 60.8 79 38.0
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 3.4e-07 60.5 281 25.3
Phvul.008G164400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.4e-07 60.5 240 22.1
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.4e-07 60.5 69 39.1
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 3.4e-07 60.5 50 42.0
Rhsim12G0132400 Rhododendron simsii HOM05D011882 ORTHO05D011057 3.4e-07 60.5 108 35.2
Gohir.A04G039650 Gossypium hirsutum HOM05D011882 ORTHO05D015081 4.5e-07 60.1 80 42.5
Lj6g0012162 Lotus japonicus HOM05D002777 ORTHO05D001516 4.5e-07 60.1 181 29.3
Psat2g036200 Pisum sativum HOM05D007807 ORTHO05D001516 4.5e-07 60.1 162 30.2
Rhsim08G0178600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.5e-07 60.1 56 44.6
Rhsim10G0135400 Rhododendron simsii HOM05D001175 ORTHO05D003291 4.5e-07 60.1 39 53.8
Actinidia11343 Actinidia chinensis HOM05D019814 ORTHO05D009356 5.9e-07 59.7 53 47.2
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.9e-07 59.7 106 31.1
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.9e-07 59.7 72 36.1
vmacro17223 Vaccinium macrocarpon HOM05D002941 ORTHO05D007802 5.9e-07 59.7 234 28.6
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 7.7e-07 59.3 52 44.2
Rhsim02G0177400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-06 58.9 55 41.8
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-06 58.9 44 43.2
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 58.5 51 49.0
Psat5g175040 Pisum sativum HOM05D007807 ORTHO05D001516 1.3e-06 58.5 166 30.1
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-06 58.5 44 50.0
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.3e-06 58.5 49 44.9
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-06 58.2 63 34.9
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.7e-06 58.2 63 34.9
vmacro23283 Vaccinium macrocarpon HOM05D000163 ORTHO05D009356 1.7e-06 58.2 44 50.0
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.2e-06 57.8 142 30.3
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-06 57.8 44 47.7
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.9e-06 57.4 69 43.5
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.9e-06 57.4 124 25.8
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-06 57.4 56 42.9
Phvul.L005801 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.9e-06 57.4 56 41.1
Psat3g104680 Pisum sativum HOM05D007807 ORTHO05D001516 2.9e-06 57.4 172 28.5
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 2.9e-06 57.4 63 34.9
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.9e-06 57.4 90 32.2
COL.COLO4_36277 Corchorus olitorius HOM05D008263 ORTHO05D009583 3.8e-06 57.0 144 29.2
PGSC0003DMG401012560 Solanum tuberosum HOM05D003264 ORTHO05D003276 3.8e-06 57.0 97 32.0
SMO276G0012 Selaginella moellendorffii HOM05D003264 ORTHO05D003276 5.0e-06 56.6 79 34.2
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 5.0e-06 56.6 69 43.5
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 6.5e-06 56.2 251 25.9
COL.COLO4_25259 Corchorus olitorius HOM05D008263 ORTHO05D009583 6.5e-06 56.2 83 38.6
Psat3g118120 Pisum sativum HOM05D007807 ORTHO05D001516 6.5e-06 56.2 173 27.7
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 6.5e-06 56.2 37 54.1
Atru.chr10.1603 Acer truncatum HOM05D016018 ORTHO05D009583 8.5e-06 55.8 147 24.5
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.5e-06 55.8 94 36.2
HanXRQChr13g0401811 Helianthus annuus HOM05D000003 ORTHO05D000004 8.5e-06 55.8 131 28.2
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 8.5e-06 55.8 305 22.3
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.5e-06 55.8 56 41.1


User provided reference genes

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