Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029893 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 9.4e-36 152.9 73 100.0
CSS0012661 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 2.2e-32 141.7 73 91.8
CSS0002479 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 2.4e-31 138.3 73 91.8
CSS0008158 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 6.5e-29 130.2 65 92.3
CSS0009145 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 6.5e-29 130.2 65 92.3
CSS0026552 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111796 2.0e-22 108.6 87 64.4
CANSAT64G2637 Cannabis sativa HOM05D000251 ORTHO05D005532 8.9e-18 93.2 49 89.8
MSTRG.25929 Avicennia marina HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Ciclev10014095m.g Citrus clementina HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Migut.A00166 Erythranthe guttata HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Gohir.A12G139000 Gossypium hirsutum HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Gohir.D12G143400 Gossypium hirsutum HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Gorai.008G154700 Gossypium raimondii HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Lj8C560G4 Lonicera japonica HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Oeu053660.3 Olea europaea HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
Thecc.02G183800 Theobroma cacao HOM05D000251 ORTHO05D005532 1.2e-17 92.8 70 68.6
CSS0015858 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.5e-17 92.4 46 95.7
CSS0032362 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D111740 1.5e-17 92.4 73 67.1
Ca_09441_v3 Cicer arietinum L. HOM05D000251 ORTHO05D005532 1.5e-17 92.4 72 66.7
Medtr2g090610 Medicago truncatula HOM05D000251 ORTHO05D005532 1.5e-17 92.4 72 66.7
Atru.chr6.2947 Acer truncatum HOM05D000251 ORTHO05D005532 2.6e-17 91.7 47 91.5
Dinv06874 Davidia involucrata HOM05D000251 ORTHO05D005532 2.6e-17 91.7 70 67.1
CSS0021916 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 4.4e-17 90.9 65 69.2
Lj3g0007891 Lotus japonicus HOM05D000251 ORTHO05D005532 4.4e-17 90.9 72 66.7
Atru.chr6.2885 Acer truncatum HOM05D000251 ORTHO05D005532 5.7e-17 90.5 47 89.4
Aqoxy4G02325 Aquilegia oxysepala HOM05D000251 ORTHO05D005532 5.7e-17 90.5 47 89.4
COL.COLO4_05022 Corchorus olitorius HOM05D000251 ORTHO05D005532 5.7e-17 90.5 47 89.4
DCAR_000770 Daucus carota HOM05D000251 ORTHO05D005532 5.7e-17 90.5 72 66.7
Dinv04805 Davidia involucrata HOM05D000251 ORTHO05D005532 5.7e-17 90.5 47 89.4
Duzib132G0720 Durio zibethinus HOM05D000251 ORTHO05D005532 5.7e-17 90.5 47 89.4
Psat6g048960 Pisum sativum HOM05D000251 ORTHO05D005532 5.7e-17 90.5 49 85.7
TPR.G6498 Trifolium pratense HOM05D000251 ORTHO05D005532 5.7e-17 90.5 72 65.3
Cpa.g.sc83.76 Carica papaya HOM05D000251 ORTHO05D005532 7.5e-17 90.1 47 89.4
Lsat_1_v5_gn_5_44941 Lactuca sativa HOM05D000251 ORTHO05D005532 7.5e-17 90.1 70 68.6
Peaxi162Scf00495g00121 Petunia axillaris HOM05D000251 ORTHO05D005532 7.5e-17 90.1 47 87.2
Rhsim04G0070600 Rhododendron simsii HOM05D000251 ORTHO05D005532 7.5e-17 90.1 72 65.3
SalBow7G3451 Salvia bowleyana HOM05D000251 ORTHO05D005532 7.5e-17 90.1 70 67.1
HanXRQChr03g0078711 Helianthus annuus HOM05D000251 ORTHO05D005532 9.8e-17 89.7 70 68.6
Actinidia11011 Actinidia chinensis HOM05D000251 ORTHO05D005532 1.3e-16 89.4 70 67.1
GSVIVG01020583001 Vitis vinifera HOM05D000251 ORTHO05D005532 1.3e-16 89.4 49 85.7
CAN.G61.27 Capsicum annuum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
CiPaw.03G180300 Carya illinoinensis HOM05D000251 ORTHO05D005532 1.7e-16 89.0 51 82.4
MELO3C018710.2 Cucumis melo HOM05D000251 ORTHO05D005532 1.7e-16 89.0 70 65.7
FvH4_5g29681 Fragaria vesca HOM05D000251 ORTHO05D005532 1.7e-16 89.0 49 85.7
FAN04G0170 Fragaria x ananassa HOM05D000251 ORTHO05D005532 1.7e-16 89.0 52 80.8
FAN08G1506 Fragaria x ananassa HOM05D000251 ORTHO05D005532 1.7e-16 89.0 52 80.8
Nitab4.5_0000159g0190 Nicotiana tabacum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
Nitab4.5_0006666g0010 Nicotiana tabacum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
PSO541G3054 Papaver somniferum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
PSO675G3162 Papaver somniferum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
RcHm_v2.0_Chr7g0223111 Rosa chinensis HOM05D000251 ORTHO05D005532 1.7e-16 89.0 49 85.7
Solyc11g017170.1 Solanum lycopersicum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
Sopen11g009100 Solanum pennellii HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
PGSC0003DMG400009218 Solanum tuberosum HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
TAR627G0503 Trochodendron aralioides HOM05D000251 ORTHO05D005532 1.7e-16 89.0 47 87.2
Actinidia30461 Actinidia chinensis HOM05D000251 ORTHO05D005532 2.2e-16 88.6 47 87.2
ECA240G1856 Erigeron canadensis HOM05D000251 ORTHO05D005532 2.2e-16 88.6 47 89.4
MD09G1243400 Malus domestica HOM05D000251 ORTHO05D005532 2.2e-16 88.6 49 85.7
MD17G1235400 Malus domestica HOM05D000251 ORTHO05D005532 2.2e-16 88.6 49 85.7
Manes.13G143600 Manihot esculenta HOM05D000251 ORTHO05D005532 2.2e-16 88.6 47 87.2
Phvul.005G101400 Phaseolus vulgaris HOM05D000251 ORTHO05D005532 2.2e-16 88.6 49 85.7
Sabra17G0010900 Salix brachista HOM05D000251 ORTHO05D005532 2.2e-16 88.6 46 93.5
Ah.16g106630 Amaranthus hybridus HOM05D000251 ORTHO05D005532 2.8e-16 88.2 47 87.2
Glyma.12G205800 Glycine max HOM05D000251 ORTHO05D005532 2.8e-16 88.2 49 83.7
Glyma.13G295100 Glycine max HOM05D000251 ORTHO05D005532 2.8e-16 88.2 49 83.7
VMungo1080G0767 Vigna mungo HOM05D000251 ORTHO05D005532 2.8e-16 88.2 49 83.7
CsaV3_7G005820 Cucumis sativus L. HOM05D000251 ORTHO05D005532 3.7e-16 87.8 47 87.2
DCAR_004456 Daucus carota HOM05D000251 ORTHO05D005532 3.7e-16 87.8 70 65.7
Potri.017G013500 Populus trichocarpa HOM05D000251 ORTHO05D005532 3.7e-16 87.8 49 85.7
Sed0000387 Sechium edule HOM05D000251 ORTHO05D005532 3.7e-16 87.8 47 87.2
vmacro09254 Vaccinium macrocarpon HOM05D000251 ORTHO05D005532 3.7e-16 87.8 72 61.1
CiPaw.04G127700 Carya illinoinensis HOM05D000251 ORTHO05D005532 6.3e-16 87.0 47 85.1
ClCG07G002540 Citrullus lanatus HOM05D000251 ORTHO05D005532 6.3e-16 87.0 46 89.1
Lalb_Chr14g0367081 Lupinus albus HOM05D000251 ORTHO05D005532 6.3e-16 87.0 49 83.7
Nn7g36698 Nelumbo nucifera HOM05D000251 ORTHO05D005532 6.3e-16 87.0 49 81.6
arahy.Tifrunner.gnm1.ann1.28NLID Arachis hypogaea HOM05D000251 ORTHO05D005532 8.3e-16 86.7 49 83.7
QL08p039799 Quercus lobata HOM05D000251 ORTHO05D005532 8.3e-16 86.7 47 85.1
Prupe.3G133300 Prunus persica HOM05D000251 ORTHO05D005532 1.1e-15 86.3 49 83.7
Sed0009923 Sechium edule HOM05D000251 ORTHO05D005532 1.1e-15 86.3 47 85.1
BcaB07g30538 Brassica carinata HOM05D000251 ORTHO05D005532 1.4e-15 85.9 49 83.7
Cfa004459 Carpinus fangiana HOM05D000251 ORTHO05D005532 1.4e-15 85.9 47 85.1
Haze_13211 Corylus avellana HOM05D000251 ORTHO05D005532 1.4e-15 85.9 47 85.1
Haze_13212 Corylus avellana HOM05D000251 ORTHO05D005532 1.4e-15 85.9 47 85.1
PGR142G3105 Punica granatum HOM05D000251 ORTHO05D005532 1.8e-15 85.5 47 85.1
Aa31LG5G3020 Aethionema arabicum HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 83.7
AT5G44240 Arabidopsis thaliana HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 83.7
CARHR178990 Cardamine hirsuta HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 83.7
Lalb_Chr24g0399971 Lupinus albus HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 81.6
MBI15_g37780_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D005532 2.4e-15 85.1 47 83.0
Sp2g09050 Schrenkiella parvula HOM05D000251 ORTHO05D005532 2.4e-15 85.1 49 83.7
unitig_32.g11477 Utricularia gibba HOM05D000251 ORTHO05D005532 2.4e-15 85.1 47 80.9
A06p47370 Brassica napus HOM05D000251 ORTHO05D005532 3.2e-15 84.7 49 81.6
BraA06t27607Z Brassica rapa HOM05D000251 ORTHO05D005532 3.2e-15 84.7 49 81.6
Sc12g0003170 Simmondsia chinensis HOM05D000251 ORTHO05D005532 3.2e-15 84.7 47 83.0
ATR0697G110 Amborella trichopoda HOM05D000251 ORTHO05D005532 5.4e-15 84.0 47 78.7
BcaC03g16645 Brassica carinata HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
BcaC06g34580 Brassica carinata HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
C02p44780 Brassica napus HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
C07p26900 Brassica napus HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
BolC2t10522H Brassica oleracea HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
BolC7t43218H Brassica oleracea HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
Eucgr.K01048 Eucalyptus grandis HOM05D000251 ORTHO05D005532 5.4e-15 84.0 47 83.0
Thhalv10003135m.g Eutrema salsugineum HOM05D000251 ORTHO05D005532 5.4e-15 84.0 49 81.6
EL10Ac2g03351 Beta vulgaris HOM05D000251 ORTHO05D005532 7.0e-15 83.6 47 85.1
AL8G15780 Arabidopsis lyrata HOM05D000251 ORTHO05D005532 9.2e-15 83.2 49 81.6
Carub.0008s0428 Capsella rubella HOM05D000251 ORTHO05D005532 9.2e-15 83.2 49 81.6
AUR62032107 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.2e-14 82.8 47 83.0
AUR62042419 Chenopodium quinoa HOM05D000251 ORTHO05D005532 1.2e-14 82.8 47 83.0
THA.LOC104826038 Tarenaya hassleriana HOM05D000251 ORTHO05D005532 1.2e-14 82.8 49 81.6
HPP92_008210 Vanilla planifolia HOM05D000251 ORTHO05D005532 1.7e-13 79.0 47 76.6
Zm00001eb326010 Zea mays HOM05D000251 ORTHO05D005532 1.1e-12 76.3 47 70.2
Os11g0446500 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 1.5e-12 75.9 47 72.3
SMO116G0312 Selaginella moellendorffii HOM05D000251 ORTHO05D005532 1.5e-12 75.9 52 69.2
Mapoly0005s0144 Marchantia polymorpha HOM05D000251 ORTHO05D005532 2.5e-12 75.1 46 73.9
SHI10378 Sapria himalayana HOM05D000251 ORTHO05D000014 4.3e-12 74.3 48 75.0
CDE11G0168 Ceratophyllum demersum HOM05D000251 ORTHO05D005532 1.2e-11 72.8 47 68.1
CBR_g6606 Chara braunii HOM05D000251 ORTHO05D005532 2.8e-11 71.6 47 66.0
Zm00001eb420520 Zea mays HOM05D000251 ORTHO05D005532 4.7e-11 70.9 49 63.3
Pp3c6_12690 Physcomitrium patens HOM05D000251 ORTHO05D005532 2.3e-10 68.6 47 63.8
AagrBONN_evm.TU.Sc2ySwM_117.621 Anthoceros agrestis HOM05D000251 ORTHO05D005532 1.5e-09 65.9 47 66.0
SEGI_32001 Sequoiadendron giganteum HOM05D000251 ORTHO05D005532 3.4e-09 64.7 47 63.8


User provided reference genes

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