Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.9e-180 635.2 343 100.0
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 4.2e-179 631.3 343 99.4
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 6.4e-159 564.3 344 87.5
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.4e-128 462.2 343 74.9
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-50 204.1 409 44.0
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.1e-37 160.6 348 38.5
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 3.6e-29 133.3 346 34.4
Actinidia20741 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.1e-28 131.7 285 41.8
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 5.8e-27 125.9 350 33.4
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 7.6e-27 125.6 358 33.0
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 6.4e-26 122.5 365 34.2
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 6.4e-26 122.5 345 32.8
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 6.0e-24 115.9 345 32.2
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 5.1e-23 112.8 357 32.8
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 9.6e-22 108.6 362 31.5
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 3.6e-21 106.7 363 33.3
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 3.6e-21 106.7 359 30.6
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 4.8e-21 106.3 361 33.0
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 3.1e-20 103.6 356 32.3
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 4.4e-19 99.8 375 30.4
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 5.8e-19 99.4 372 30.6
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.7e-18 97.8 356 29.2
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 4.9e-18 96.3 347 30.8
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 8.4e-18 95.5 345 29.9
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 1.9e-17 94.4 351 30.2
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 3.2e-17 93.6 346 28.6
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 4.2e-17 93.2 345 30.1
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 2.7e-16 90.5 372 29.3
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 6.0e-16 89.4 361 27.7
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.0e-15 88.6 339 28.6
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.3e-15 88.2 348 28.4
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.3e-15 87.4 349 30.9
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.6e-15 85.9 350 30.9
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 6.6e-15 85.9 376 29.8
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.1e-14 85.1 353 27.5
CSS0008692 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.5e-14 84.7 67 70.1
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.3e-14 83.6 351 29.3
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 3.3e-14 83.6 360 29.7
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 4.3e-14 83.2 365 27.1
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.3e-14 83.2 357 28.9
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.6e-14 82.0 361 27.7
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.3e-13 81.6 366 27.9
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 1.3e-13 81.6 366 29.2
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 2.8e-13 80.5 370 28.6
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 3.6e-13 80.1 360 27.2
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 6.2e-13 79.3 349 29.8
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 5.3e-12 76.3 370 26.2
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 5.3e-12 76.3 345 28.4
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 5.3e-12 76.3 354 28.8
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 6.9e-12 75.9 366 27.6
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 9.0e-12 75.5 352 23.9
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 9.0e-12 75.5 348 29.9
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 9.0e-12 75.5 355 27.6
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 9.0e-12 75.5 386 27.5
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.2e-11 75.1 363 28.4
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.0e-11 74.3 353 28.3
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 9.9e-11 72.0 349 27.5
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 9.9e-11 72.0 341 26.7
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 9.9e-11 72.0 345 25.8
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 1.7e-10 71.2 342 28.1
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 2.2e-10 70.9 355 25.1
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 2.2e-10 70.9 353 27.8
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 2.2e-10 70.9 357 27.2
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 4.9e-10 69.7 382 27.5
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 8.4e-10 68.9 342 26.9
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.4e-09 68.2 341 26.4
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 1.4e-09 68.2 337 26.1
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 1.9e-09 67.8 356 28.4
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 2.4e-09 67.4 337 23.7
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 5.4e-09 66.2 353 25.8
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 5.4e-09 66.2 231 29.4
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 5.4e-09 66.2 356 27.8
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 9.3e-09 65.5 362 29.0
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 1.2e-08 65.1 352 26.4
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 1.2e-08 65.1 352 26.4
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 1.6e-08 64.7 229 33.2
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 1.6e-08 64.7 349 26.9
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 1.6e-08 64.7 339 28.0
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.1e-08 64.3 347 26.5
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 2.1e-08 64.3 352 25.6
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 2.1e-08 64.3 357 26.9
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 2.7e-08 63.9 367 27.2
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 3.5e-08 63.5 367 27.2
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 4.6e-08 63.2 340 27.6
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 4.6e-08 63.2 355 26.5
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 4.6e-08 63.2 367 26.2
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 4.6e-08 63.2 320 26.6
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 4.6e-08 63.2 345 24.6
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 6.0e-08 62.8 346 27.2
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 7.9e-08 62.4 353 28.0
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.3e-07 61.6 359 26.7
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 3.0e-07 60.5 377 27.9
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 5.1e-07 59.7 332 25.9
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 5.1e-07 59.7 347 25.4
Hund14289 Selenicereus undatus HOM05D029928 ORTHO05D003520 5.1e-07 59.7 362 23.8
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 8.7e-07 58.9 358 26.0
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 8.7e-07 58.9 344 27.6
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 1.1e-06 58.5 222 30.6
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 1.5e-06 58.2 378 25.1
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.5e-06 58.2 252 29.4
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.5e-06 57.4 359 25.3
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 3.3e-06 57.0 346 26.9
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 4.3e-06 56.6 352 25.6
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 5.6e-06 56.2 349 25.2
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 7.4e-06 55.8 346 25.1
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 7.4e-06 55.8 371 27.2
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 9.6e-06 55.5 350 23.7
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 9.6e-06 55.5 318 25.5
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 9.6e-06 55.5 362 26.0


User provided reference genes

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