Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029860 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 7.2e-184 647.1 332 100.0
CSS0022238 Camellia sinensis var. sinensis HOM05D003457 ORTHO05D009249 4.7e-183 644.4 332 99.7
Actinidia34268 Actinidia chinensis HOM05D003457 ORTHO05D009249 1.8e-94 350.1 342 62.3
Actinidia08697 Actinidia chinensis HOM05D003457 ORTHO05D009249 2.4e-94 349.7 334 62.6
Dinv35380 Davidia involucrata HOM05D003457 ORTHO05D009746 3.1e-94 349.4 368 57.9
Dinv29212 Davidia involucrata HOM05D003457 ORTHO05D009249 1.0e-89 334.3 359 56.3
Rhsim03G0215300 Rhododendron simsii HOM05D003457 ORTHO05D009249 2.0e-61 240.4 263 57.8
Gohir.D04G000050 Gossypium hirsutum HOM05D003457 ORTHO05D009249 3.5e-53 213.0 351 42.5
Gorai.012G000700 Gossypium raimondii HOM05D003457 ORTHO05D009249 5.6e-51 205.7 351 41.6
Manes.01G043100 Manihot esculenta HOM05D003457 ORTHO05D009249 1.2e-50 204.5 367 42.0
Thecc.03G208400 Theobroma cacao HOM05D003457 ORTHO05D009249 6.2e-50 202.2 360 42.2
Nitab4.5_0000319g0070 Nicotiana tabacum HOM05D003457 ORTHO05D009249 5.8e-48 195.7 356 40.7
Nn1g00443 Nelumbo nucifera HOM05D003457 ORTHO05D009249 9.8e-48 194.9 372 39.0
Duzib205G0475 Durio zibethinus HOM05D003457 ORTHO05D009249 1.4e-46 191.0 375 39.7
Duzib084G1096 Durio zibethinus HOM05D003457 ORTHO05D009249 1.2e-45 188.0 381 39.4
Gohir.D04G000080 Gossypium hirsutum HOM05D003457 ORTHO05D009249 1.2e-45 188.0 330 40.6
PGSC0003DMG400000588 Solanum tuberosum HOM05D003457 ORTHO05D009249 5.0e-44 182.6 360 39.4
Duzib068G0780 Durio zibethinus HOM05D003457 ORTHO05D009249 1.9e-43 180.6 327 40.7
Solyc03g081310.3 Solanum lycopersicum HOM05D003457 ORTHO05D009249 4.3e-43 179.5 352 37.8
Sopen03g022030 Solanum pennellii HOM05D003457 ORTHO05D009249 1.2e-42 177.9 350 38.0
TAR636G2436 Trochodendron aralioides HOM05D003457 ORTHO05D009249 2.3e-41 173.7 271 43.5
TWI23G0841 Tripterygium wilfordii HOM05D003457 ORTHO05D009249 6.8e-41 172.2 349 38.1
MBI12_g09299_MAGBIO Magnolia biondii HOM05D003457 ORTHO05D009249 2.0e-40 170.6 298 43.0
MD07G1298800 Malus domestica HOM05D003457 ORTHO05D009249 5.8e-40 169.1 372 38.4
MSTRG.31 Avicennia marina HOM05D003457 ORTHO05D009249 1.3e-39 167.9 335 40.3
Nitab4.5_0005040g0050 Nicotiana tabacum HOM05D003457 ORTHO05D009249 1.3e-39 167.9 424 35.4
RcHm_v2.0_Chr1g0382841 Rosa chinensis HOM05D003457 ORTHO05D009249 2.9e-39 166.8 340 37.1
Peaxi162Scf00300g00833 Petunia axillaris HOM05D003457 ORTHO05D009249 4.9e-39 166.0 323 43.0
Ciclev10020653m.g Citrus clementina HOM05D003457 ORTHO05D009249 8.3e-39 165.2 328 39.6
TAR629G1045 Trochodendron aralioides HOM05D003457 ORTHO05D009249 4.1e-38 162.9 335 41.8
Migut.F00990 Erythranthe guttata HOM05D003457 ORTHO05D009249 1.6e-37 161.0 335 40.6
MD01G1228100 Malus domestica HOM05D003457 ORTHO05D009249 2.1e-37 160.6 377 36.6
Cc02_g00840 Coffea canephora HOM05D003457 ORTHO05D009249 3.5e-37 159.8 346 39.6
FvH4_7g32890 Fragaria vesca HOM05D003457 ORTHO05D009249 5.1e-36 156.0 347 35.7
Prupe.2G318600 Prunus persica HOM05D003457 ORTHO05D009249 1.1e-35 154.8 410 34.1
Cpa.g.sc3.155 Carica papaya HOM05D003457 ORTHO05D009249 2.5e-35 153.7 295 39.0
CAN.G303.15 Capsicum annuum HOM05D003457 ORTHO05D009249 3.3e-35 153.3 335 35.2
SGA_v2.0_scaffold141G35555 Striga asiatica HOM05D003457 ORTHO05D009249 4.3e-35 152.9 330 40.0
THA.LOC104798986 Tarenaya hassleriana HOM05D003457 ORTHO05D009249 9.5e-35 151.8 322 37.6
SalBow2G2220 Salvia bowleyana HOM05D003457 ORTHO05D009249 4.7e-34 149.4 326 38.0
Aqoxy5G04336 Aquilegia oxysepala HOM05D003457 ORTHO05D009249 5.2e-33 146.0 333 37.2
Aa31LG11G3740 Aethionema arabicum HOM05D003457 ORTHO05D009249 8.9e-33 145.2 341 37.0
PGR142G1344 Punica granatum HOM05D003457 ORTHO05D009249 1.2e-32 144.8 332 37.3
CiPaw.06G041400 Carya illinoinensis HOM05D003457 ORTHO05D009249 2.6e-32 143.7 355 34.4
Oeu037975.2 Olea europaea HOM05D003457 ORTHO05D009249 7.6e-32 142.1 368 35.3
FAN01G1561 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.3e-31 141.4 335 34.9
EL10Ac3g05182 Beta vulgaris HOM05D003457 ORTHO05D009249 2.9e-31 140.2 340 35.9
Lsat_1_v5_gn_8_4361 Lactuca sativa HOM05D003457 ORTHO05D009249 2.9e-31 140.2 250 41.6
Lsat_1_v5_gn_9_3980 Lactuca sativa HOM05D003457 ORTHO05D009249 2.9e-31 140.2 253 42.3
Potri.015G005100 Populus trichocarpa HOM05D003457 ORTHO05D009249 2.9e-31 140.2 354 35.6
MELO3C033815.2 Cucumis melo HOM05D003457 ORTHO05D009249 4.9e-31 139.4 293 35.2
FAN03G1743 Fragaria x ananassa HOM05D003457 ORTHO05D009746 4.9e-31 139.4 333 33.9
Sp2g22840 Schrenkiella parvula HOM05D003457 ORTHO05D009249 4.9e-31 139.4 342 35.7
Cfa016162 Carpinus fangiana HOM05D003457 ORTHO05D009249 6.4e-31 139.0 355 36.3
Lsat_1_v5_gn_5_51360 Lactuca sativa HOM05D003457 ORTHO05D009249 6.4e-31 139.0 253 41.9
Eucgr.K00429 Eucalyptus grandis HOM05D003457 ORTHO05D009249 1.1e-30 138.3 356 35.4
Lsat_1_v5_gn_1_120581 Lactuca sativa HOM05D003457 ORTHO05D009249 1.1e-30 138.3 250 40.4
FAN10G0211 Fragaria x ananassa HOM05D003457 ORTHO05D009746 1.4e-30 137.9 334 32.9
CARHR188920 Cardamine hirsuta HOM05D003457 ORTHO05D009249 2.4e-30 137.1 246 38.6
DCAR_020371 Daucus carota HOM05D003457 ORTHO05D009249 2.4e-30 137.1 236 42.8
Thhalv10005511m.g Eutrema salsugineum HOM05D003457 ORTHO05D009249 2.4e-30 137.1 338 35.2
AL6G36090 Arabidopsis lyrata HOM05D003457 ORTHO05D009249 1.6e-29 134.4 346 35.3
CsaV3_5G004840 Cucumis sativus L. HOM05D003457 ORTHO05D009249 1.6e-29 134.4 336 32.7
Lsat_1_v5_gn_7_20360 Lactuca sativa HOM05D003457 ORTHO05D009249 1.6e-29 134.4 284 35.6
FAN10G3191 Fragaria x ananassa HOM05D003457 ORTHO05D009746 3.9e-28 129.8 334 31.4
AT5G24500 Arabidopsis thaliana HOM05D003457 ORTHO05D009249 2.8e-26 123.6 346 34.4
ClCG00G005020 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.8e-26 123.6 296 33.8
ClCG01G004590 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.8e-26 123.6 296 33.8
ClCG01G004630 Citrullus lanatus HOM05D003457 ORTHO05D009249 2.8e-26 123.6 296 33.8
HanXRQChr08g0225921 Helianthus annuus HOM05D003457 ORTHO05D009249 6.9e-25 119.0 278 36.3
Sabra15G0003600 Salix brachista HOM05D003457 ORTHO05D009249 9.0e-25 118.6 290 37.6
Carub.0006s2232 Capsella rubella HOM05D003457 ORTHO05D009249 2.0e-24 117.5 353 35.1
Ah.07g204690 Amaranthus hybridus HOM05D003457 ORTHO05D009249 5.8e-24 115.9 222 36.9
AUR62035619 Chenopodium quinoa HOM05D003457 ORTHO05D009249 7.6e-24 115.5 301 33.6
Sc13g0010260 Simmondsia chinensis HOM05D003457 ORTHO05D009249 7.6e-24 115.5 332 34.9
ATR1155G002 Amborella trichopoda HOM05D003457 ORTHO05D009249 5.4e-22 109.4 273 32.6
Lj1g0002342 Lotus japonicus HOM05D003457 ORTHO05D009249 5.4e-22 109.4 259 35.9
PSO782G2427 Papaver somniferum HOM05D003457 ORTHO05D009249 1.2e-21 108.2 248 36.7
HPP92_015415 Vanilla planifolia HOM05D003457 ORTHO05D009249 4.6e-21 106.3 304 34.5
Potri.012G021300 Populus trichocarpa HOM05D003457 ORTHO05D009249 6.0e-21 105.9 289 33.2
CiPaw.02G048700 Carya illinoinensis HOM05D003457 ORTHO05D009249 7.8e-21 105.5 214 36.0
AUR62006007 Chenopodium quinoa HOM05D003457 ORTHO05D009746 1.3e-20 104.8 327 31.8
Sabra12G0012300 Salix brachista HOM05D003457 ORTHO05D009249 1.3e-20 104.8 287 34.5
VMungo1309G3135 Vigna mungo HOM05D003457 ORTHO05D009249 2.3e-20 104.0 233 34.3
COL.COLO4_14368 Corchorus olitorius HOM05D003457 ORTHO05D009249 3.0e-20 103.6 324 32.4
Ca_16777_v3 Cicer arietinum L. HOM05D003457 ORTHO05D009249 3.9e-20 103.2 216 34.3
Glyma.04G228600 Glycine max HOM05D003457 ORTHO05D009249 3.9e-20 103.2 234 34.6
Sabra05G0139600 Salix brachista HOM05D003457 ORTHO05D009249 1.9e-19 100.9 273 33.3
Psat5g072040 Pisum sativum HOM05D003457 ORTHO05D009249 2.5e-19 100.5 241 34.9
CDE02G1140 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 3.3e-19 100.1 329 31.9
Phvul.009G045300 Phaseolus vulgaris HOM05D003457 ORTHO05D009249 3.3e-19 100.1 226 36.7
TPR.G33664 Trifolium pratense HOM05D003457 ORTHO05D009249 3.3e-19 100.1 262 31.3
BcaB07g29912 Brassica carinata HOM05D003457 ORTHO05D009249 4.3e-19 99.8 312 28.8
Medtr3g092670 Medicago truncatula HOM05D003457 ORTHO05D009249 7.3e-19 99.0 228 34.6
C02p60250 Brassica napus HOM05D003457 ORTHO05D009249 9.6e-19 98.6 227 32.2
CDE01G0392 Ceratophyllum demersum HOM05D003457 ORTHO05D009249 9.6e-19 98.6 329 29.8
A02p40300 Brassica napus HOM05D003457 ORTHO05D009249 1.3e-18 98.2 220 33.2
BraA02t08999Z Brassica rapa HOM05D003457 ORTHO05D009249 1.3e-18 98.2 220 32.7
unitig_90.g27506 Utricularia gibba HOM05D003457 ORTHO05D009249 1.3e-18 98.2 165 47.3
BolC2t12082H Brassica oleracea HOM05D003457 ORTHO05D009249 2.1e-18 97.4 227 33.0
Lsat_1_v5_gn_7_39641 Lactuca sativa HOM05D003457 ORTHO05D009249 3.6e-18 96.7 185 40.0
Glyma.06G136400 Glycine max HOM05D003457 ORTHO05D009249 3.1e-17 93.6 227 35.7
BcaC03g17967 Brassica carinata HOM05D003457 ORTHO05D009249 6.9e-17 92.4 312 28.5
Atru.chr12.2426 Acer truncatum HOM05D003457 ORTHO05D009249 1.7e-15 87.8 243 35.4
Lsat_1_v5_gn_5_150000 Lactuca sativa HOM05D003457 ORTHO05D009249 2.2e-15 87.4 179 38.5
Lalb_Chr08g0239631 Lupinus albus HOM05D003457 ORTHO05D009249 2.7e-13 80.5 243 32.5
QL09p007211 Quercus lobata HOM05D003457 ORTHO05D009249 1.9e-11 74.3 329 29.5
PSO063G5804 Papaver somniferum HOM05D003457 ORTHO05D009249 4.3e-11 73.2 207 35.7
SEGI_37736 Sequoiadendron giganteum HOM05D013917 ORTHO05D013169 7.4e-11 72.4 252 27.4
GSVIVG01038640001 Vitis vinifera HOM05D003457 ORTHO05D009249 3.8e-07 60.1 90 46.7


User provided reference genes

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