Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 4.7e-156 554.7 320 100.0
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 4.0e-115 418.7 332 80.7
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 1.2e-37 161.4 137 89.1
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 1.2e-34 151.4 140 87.1
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 1.7e-33 147.5 137 86.1
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 5.0e-33 146.0 136 87.5
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 3.3e-32 143.3 139 83.5
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 4.3e-32 142.9 140 81.4
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 4.3e-32 142.9 140 83.6
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 5.6e-32 142.5 140 83.6
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 7.3e-32 142.1 137 85.4
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 1.6e-31 141.0 136 80.9
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 2.8e-31 140.2 139 82.7
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 3.6e-31 139.8 140 82.9
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 3.6e-31 139.8 133 85.7
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 3.6e-31 139.8 136 82.4
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 6.2e-31 139.0 141 83.7
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 8.1e-31 138.7 141 83.0
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 8.1e-31 138.7 141 83.0
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 1.1e-30 138.3 138 80.4
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 5.2e-30 136.0 141 82.3
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 6.8e-30 135.6 137 82.5
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 8.9e-30 135.2 161 73.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 1.2e-29 134.8 137 78.8
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.2e-29 134.8 155 74.2
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 1.5e-29 134.4 157 72.6
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 3.4e-29 133.3 136 80.9
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 3.4e-29 133.3 136 82.4
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 7.5e-29 132.1 170 68.8
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 9.9e-29 131.7 126 88.1
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 1.3e-28 131.3 137 82.5
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 4.9e-28 129.4 138 80.4
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 1.1e-27 128.3 130 83.8
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.2e-27 126.7 142 78.2
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 3.2e-27 126.7 124 86.3
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 4.1e-27 126.3 140 79.3
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 4.1e-27 126.3 136 80.9
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 1.6e-26 124.4 124 85.5
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 2.7e-26 123.6 136 80.9
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 4.6e-26 122.9 140 79.3
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.0e-25 121.7 140 79.3
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 1.0e-25 121.7 140 79.3
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 1.3e-25 121.3 123 86.2
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 1.7e-25 120.9 136 78.7
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 2.3e-25 120.6 139 74.8
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 2.3e-25 120.6 138 74.6
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 3.0e-25 120.2 122 86.1
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 3.9e-25 119.8 125 84.0
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 5.1e-25 119.4 138 77.5
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 6.6e-25 119.0 137 77.4
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 6.6e-25 119.0 143 75.5
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 8.6e-25 118.6 143 76.2
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 8.6e-25 118.6 139 77.0
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.1e-24 118.2 156 69.9
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 4.3e-24 116.3 140 76.4
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 9.5e-24 115.2 139 76.3
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.2e-23 114.8 121 86.0
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 1.6e-23 114.4 140 75.0
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 3.6e-23 113.2 122 83.6
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 6.2e-23 112.5 139 74.8
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.1e-22 111.7 131 77.1
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 1.1e-22 111.7 151 68.2
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.1e-22 111.7 126 81.7
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 1.4e-22 111.3 127 79.5
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 1.8e-22 110.9 177 63.3
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.1e-22 110.2 139 74.8
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 3.1e-22 110.2 128 79.7
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 5.2e-22 109.4 122 82.8
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 5.2e-22 109.4 122 82.8
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 6.8e-22 109.0 129 77.5
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 2.6e-21 107.1 142 77.5
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 3.4e-21 106.7 136 77.9
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 3.4e-21 106.7 143 74.1
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 5.8e-21 105.9 117 83.8
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 5.8e-21 105.9 131 74.8
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 5.8e-21 105.9 124 79.0
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.3e-20 104.8 89 83.1
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 1.3e-20 104.8 124 82.3
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 1.3e-20 104.8 143 69.2
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 1.7e-20 104.4 124 81.5
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 2.9e-20 103.6 65 83.1
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 2.9e-20 103.6 144 72.9
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 3.8e-20 103.2 124 75.0
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 6.4e-20 102.4 155 68.4
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 8.4e-20 102.1 141 71.6
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 1.9e-19 100.9 118 80.5
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 1.9e-19 100.9 138 69.6
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 1.9e-19 100.9 118 80.5
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 1.9e-19 100.9 138 47.1
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.4e-19 100.5 144 64.6
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 3.2e-19 100.1 118 79.7
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 3.2e-19 100.1 118 79.7
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 5.4e-19 99.4 118 79.7
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 2.1e-18 97.4 124 78.2
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 2.7e-18 97.1 88 78.4
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 2.7e-18 97.1 65 76.9
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 4.6e-18 96.3 122 75.4
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 6.0e-18 95.9 65 73.8
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 6.0e-18 95.9 88 77.3
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 1.3e-17 94.7 121 77.7
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 8.7e-17 92.0 88 76.1
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.1e-16 91.7 88 73.9
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 6.2e-15 85.9 139 67.6
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 6.2e-15 85.9 137 64.2
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 8.1e-15 85.5 98 87.8
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.8e-14 84.3 164 60.4
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 1.2e-13 81.6 111 59.5
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 1.9e-11 74.3 65 61.5
unitig_0.g5 Utricularia gibba HOM05D000887 ORTHO05D000908 1.8e-06 57.8 92 79.3


User provided reference genes

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