Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029791 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.9e-70 267.7 135 100.0
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 9.2e-69 263.5 135 97.8
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 1.4e-29 133.3 115 59.1
Nn3g17585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 7.3e-26 120.9 113 53.1
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 9.9e-23 110.5 77 66.2
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 3.8e-22 108.6 128 43.8
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 8.4e-22 107.5 94 53.2
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 1.4e-21 106.7 94 52.1
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 3.2e-21 105.5 94 52.1
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.2e-21 105.1 119 41.2
Ciclev10033630m.g Citrus clementina HOM05D008138 ORTHO05D010043 4.6e-20 101.7 96 49.0
Dinv33884 Davidia involucrata HOM05D008138 ORTHO05D010043 3.6e-17 92.0 95 44.2
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 4.8e-17 91.7 117 42.7
MSTRG.19633 Avicennia marina HOM05D008138 ORTHO05D010043 4.0e-16 88.6 90 48.9
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.3e-16 88.2 92 46.7
Migut.E00266 Erythranthe guttata HOM05D008138 ORTHO05D010043 3.8e-14 82.0 121 40.5
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 6.4e-14 81.3 99 42.4
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 1.2e-12 77.0 97 40.2
Sopen01g005610 Solanum pennellii HOM05D056881 ORTHO05D010043 1.6e-12 76.6 110 33.6
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 2.7e-12 75.9 122 31.1
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 6.0e-12 74.7 113 38.1
Haze_14354 Corylus avellana HOM05D008138 ORTHO05D010043 1.3e-11 73.6 108 37.0
Solyc01g010060.2 Solanum lycopersicum HOM05D056881 ORTHO05D010043 1.8e-11 73.2 105 33.3
Dinv16586 Davidia involucrata HOM05D008138 ORTHO05D010043 3.0e-11 72.4 115 40.9
Cfa007720 Carpinus fangiana HOM05D008138 ORTHO05D010043 5.1e-11 71.6 94 37.2
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 5.1e-11 71.6 89 37.1
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 8.7e-11 70.9 79 36.7
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 1.1e-10 70.5 95 35.8
Migut.E00264 Erythranthe guttata HOM05D008138 ORTHO05D010043 1.5e-10 70.1 127 37.8
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 1.9e-10 69.7 91 37.4
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 3.3e-10 68.9 117 33.3
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 3.3e-10 68.9 100 38.0
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 3.3e-10 68.9 83 38.6
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 4.3e-10 68.6 86 41.9
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 4.3e-10 68.6 118 30.5
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 6.2e-09 64.7 102 31.4
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.2e-09 64.3 90 38.9
QL08p042110 Quercus lobata HOM05D008138 ORTHO05D010043 1.8e-08 63.2 116 30.2
Actinidia07751 Actinidia chinensis HOM05D008138 ORTHO05D010043 2.4e-08 62.8 92 40.2
Rhsim09G0118800 Rhododendron simsii HOM05D008138 ORTHO05D010043 3.1e-08 62.4 81 40.7
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.0e-08 62.0 99 35.4
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.3e-08 61.6 97 35.1
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.3e-08 61.6 97 35.1
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.3e-08 61.6 99 35.4
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 9.0e-08 60.8 89 37.1
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 9.0e-08 60.8 86 37.2
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-07 59.7 98 33.7
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.0e-07 59.7 97 34.0
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 2.0e-07 59.7 89 39.3
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 2.6e-07 59.3 97 34.0
QL10p055376 Quercus lobata HOM05D008138 ORTHO05D010043 2.6e-07 59.3 79 31.6
Eucgr.B03099 Eucalyptus grandis HOM05D008138 ORTHO05D010043 4.5e-07 58.5 87 36.8
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.7e-06 56.6 97 33.0
Sabra13G0105400 Salix brachista HOM05D008138 ORTHO05D010043 3.8e-06 55.5 93 29.0
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 6.5e-06 54.7 83 34.9
QL10p055147 Quercus lobata HOM05D008138 ORTHO05D010043 6.5e-06 54.7 101 27.7
QL10p055198 Quercus lobata HOM05D008138 ORTHO05D010043 6.5e-06 54.7 125 32.0


User provided reference genes

Program Settings