Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029785 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.6e-42 174.5 88 100.0
CSS0006667 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.4e-33 145.2 87 83.9
CSS0050060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.5e-32 142.5 87 82.8
CSS0050109 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000140 1.5e-32 142.5 87 81.6
CSS0000995 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.4e-32 141.4 87 81.6
CSS0048435 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 5.8e-32 140.6 87 82.8
CSS0030175 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.7e-31 139.0 87 78.2
CSS0038593 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.4e-31 136.7 87 79.3
CSS0023971 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.5e-29 131.3 87 78.2
CSS0040161 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 6.0e-29 130.6 84 78.6
CSS0026146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.6e-26 122.5 72 83.3
CSS0040739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.5e-24 114.4 87 70.1
CSS0015461 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.2e-22 107.8 83 71.1
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.5e-19 99.4 84 57.1
CSS0044283 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 3.6e-13 78.2 48 75.0
Hund01843 Selenicereus undatus HOM05D012237 ORTHO05D010947 3.0e-12 75.1 85 50.6
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 6.3e-10 67.4 83 39.8
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 6.3e-10 67.4 83 39.8
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.2e-08 63.2 83 38.6
CSS0042933 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.2e-08 63.2 40 77.5
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.5e-08 61.2 40 77.5
arahy.Tifrunner.gnm1.ann1.8AJD73 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.9e-08 60.8 84 39.3
Rhsim01G0122200 Rhododendron simsii HOM05D000367 ORTHO05D002688 7.7e-08 60.5 82 36.6
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 7.7e-08 60.5 82 36.6
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.3e-07 59.7 40 75.0
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 2.9e-07 58.5 74 39.2
Lsat_1_v5_gn_5_155181 Lactuca sativa HOM05D005504 ORTHO05D002688 5.0e-07 57.8 85 38.8
Lsat_1_v5_gn_5_155201 Lactuca sativa HOM05D000665 ORTHO05D000140 5.0e-07 57.8 85 38.8
CiPaw.14G011200 Carya illinoinensis HOM05D007780 ORTHO05D000140 6.5e-07 57.4 82 40.2
Hund19303 Selenicereus undatus HOM05D000665 ORTHO05D000140 6.5e-07 57.4 73 46.6
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 8.5e-07 57.0 40 70.0
LjContig00430g0006539 Lotus japonicus HOM05D007780 ORTHO05D000140 8.5e-07 57.0 82 41.5
Prupe.3G281200 Prunus persica HOM05D007780 ORTHO05D000140 1.1e-06 56.6 82 42.7
MBI17_g12502_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 1.4e-06 56.2 85 40.0
arahy.Tifrunner.gnm1.ann1.G4EFNG Arachis hypogaea HOM05D000034 ORTHO05D002688 2.5e-06 55.5 83 38.6
BcaC03g16144 Brassica carinata HOM05D007780 ORTHO05D000140 3.2e-06 55.1 82 37.8
A02p24850 Brassica napus HOM05D007780 ORTHO05D000140 3.2e-06 55.1 85 37.6
C02p39310 Brassica napus HOM05D007780 ORTHO05D000140 3.2e-06 55.1 82 37.8
BolC2t09942H Brassica oleracea HOM05D007780 ORTHO05D000140 3.2e-06 55.1 82 37.8
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 3.2e-06 55.1 85 37.6
Glyma.06G311800 Glycine max HOM05D007780 ORTHO05D000140 3.2e-06 55.1 82 41.5
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 3.2e-06 55.1 85 38.8
Nn2g15680 Nelumbo nucifera HOM05D007780 ORTHO05D000140 3.2e-06 55.1 59 45.8
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 4.2e-06 54.7 83 32.5
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.2e-06 54.7 83 36.1
Lsat_1_v5_gn_7_17241 Lactuca sativa HOM05D005504 ORTHO05D002688 4.2e-06 54.7 85 36.5
Manes.11G009500 Manihot esculenta HOM05D007780 ORTHO05D000140 4.2e-06 54.7 82 40.2
Potri.003G190900 Populus trichocarpa HOM05D007780 ORTHO05D000140 4.2e-06 54.7 82 40.2
Sp6g02460 Schrenkiella parvula HOM05D007780 ORTHO05D000140 4.2e-06 54.7 82 40.2
THA.LOC104814049 Tarenaya hassleriana HOM05D007780 ORTHO05D000140 4.2e-06 54.7 82 40.2
TPR.G11842 Trifolium pratense HOM05D000001 ORTHO05D000003 4.2e-06 54.7 87 34.5
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 5.5e-06 54.3 87 35.6
MBI09_g19794_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 5.5e-06 54.3 84 36.9
TAR524G0001 Trochodendron aralioides HOM05D000071 ORTHO05D000140 5.5e-06 54.3 71 39.4
TAR636G0533 Trochodendron aralioides HOM05D000665 ORTHO05D000140 5.5e-06 54.3 83 39.8
GSVIVG01012454001 Vitis vinifera HOM05D007780 ORTHO05D000140 5.5e-06 54.3 82 39.0
Atru.chr12.1187 Acer truncatum HOM05D007780 ORTHO05D000140 7.2e-06 53.9 82 39.0
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 7.2e-06 53.9 79 36.7
Carub.0006s3459 Capsella rubella HOM05D007780 ORTHO05D000140 7.2e-06 53.9 82 37.8
CiPaw.13G017800 Carya illinoinensis HOM05D007780 ORTHO05D000140 7.2e-06 53.9 82 40.2
Thhalv10028829m.g Eutrema salsugineum HOM05D007780 ORTHO05D000140 7.2e-06 53.9 82 39.0
TPR.G16371 Trifolium pratense HOM05D007780 ORTHO05D000140 7.2e-06 53.9 82 41.5
vmacro07033 Vaccinium macrocarpon HOM05D000665 ORTHO05D000140 7.2e-06 53.9 87 35.6
Aa31LG5G2180 Aethionema arabicum HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 9.4e-06 53.5 83 33.7
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 9.4e-06 53.5 83 36.1
Ca_24043_v3 Cicer arietinum L. HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0
Ciclev10001966m.g Citrus clementina HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0
COL.COLO4_02741 Corchorus olitorius HOM05D001221 ORTHO05D009285 9.4e-06 53.5 82 37.8
Haze_20106 Corylus avellana HOM05D000665 ORTHO05D000140 9.4e-06 53.5 83 33.7
Gohir.A05G284100 Gossypium hirsutum HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0
Gohir.D05G285000 Gossypium hirsutum HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0
Gorai.009G300000 Gossypium raimondii HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0
Lsat_1_v5_gn_8_8121 Lactuca sativa HOM05D005504 ORTHO05D002688 9.4e-06 53.5 84 39.3
Lj9A650T83 Lonicera japonica HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 40.2
MD07G1041200 Malus domestica HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 40.2
Medtr3g045460 Medicago truncatula HOM05D000665 ORTHO05D000140 9.4e-06 53.5 87 33.3
Sabra03G0140600 Salix brachista HOM05D007780 ORTHO05D000140 9.4e-06 53.5 82 39.0


User provided reference genes

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