Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 0.0e+00 1330.5 682 100.0
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 2.8e-238 828.9 654 70.0
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 1.4e-229 800.0 628 69.6
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 7.8e-209 731.1 712 60.3
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 9.6e-191 671.0 626 61.8
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 5.5e-186 655.2 712 56.9
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 1.9e-178 630.2 707 53.6
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 2.3e-168 596.7 758 51.6
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 6.5e-155 552.0 723 49.7
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 5.7e-151 538.9 716 51.5
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 3.5e-148 529.6 624 52.7
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 2.1e-145 520.4 710 47.6
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 7.0e-141 505.4 696 46.7
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.9e-140 502.3 707 46.0
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 5.5e-138 495.7 700 46.6
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 2.1e-137 493.8 691 46.5
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 4.5e-132 476.1 682 45.7
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 2.5e-130 470.3 711 42.9
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 2.5e-130 470.3 710 42.3
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 2.8e-129 466.8 712 45.1
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 1.3e-123 448.0 700 43.6
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.3e-123 447.2 606 46.7
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 1.5e-122 444.5 574 47.0
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 1.2e-121 441.4 714 43.6
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.7e-121 439.5 636 42.8
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 4.7e-121 439.5 699 43.2
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 8.0e-121 438.7 527 49.5
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 4.1e-117 426.4 534 48.9
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 1.6e-116 424.5 661 41.9
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 2.0e-116 424.1 697 42.2
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 2.7e-116 423.7 711 41.8
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.7e-116 423.7 596 46.0
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 1.0e-115 421.8 704 43.8
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 5.0e-115 419.5 596 45.8
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 4.3e-114 416.4 702 41.0
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 4.3e-114 416.4 596 45.6
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 4.7e-113 412.9 703 40.0
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 8.0e-113 412.1 706 40.8
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 1.4e-112 411.4 673 41.9
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.8e-112 411.0 618 44.2
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 2.3e-112 410.6 618 44.2
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.8e-112 409.1 616 44.3
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 6.8e-112 409.1 702 40.0
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.2e-111 408.3 769 39.1
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 1.2e-111 408.3 706 40.2
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 1.1e-109 401.7 702 42.3
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.1e-109 401.7 810 38.5
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 7.1e-109 399.1 726 40.1
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 4.6e-108 396.4 642 42.2
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 7.8e-108 395.6 640 42.5
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 3.0e-107 393.7 642 42.8
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 5.1e-107 392.9 668 42.2
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 5.1e-107 392.9 706 39.7
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 7.3e-106 389.0 629 42.4
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 2.1e-105 387.5 627 42.3
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 2.8e-105 387.1 703 40.1
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 4.7e-105 386.3 707 40.5
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 8.9e-104 382.1 649 42.1
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 2.6e-103 380.6 713 40.7
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 3.7e-102 376.7 666 38.1
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 6.4e-102 375.9 712 38.3
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 8.3e-102 375.6 674 39.9
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 2.4e-101 374.0 674 39.2
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 7.1e-101 372.5 712 38.2
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 1.2e-100 371.7 639 40.4
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 1.6e-100 371.3 705 40.0
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 7.8e-100 369.0 684 39.6
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 1.0e-99 368.6 700 37.4
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 2.3e-99 367.5 689 36.7
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 2.5e-98 364.0 629 39.9
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 8.1e-97 359.0 704 39.9
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.4e-96 357.5 709 38.4
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 2.6e-95 354.0 678 39.4
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 4.4e-95 353.2 626 40.7
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.7e-94 351.3 674 40.1
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 4.9e-94 349.7 715 39.9
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 2.1e-92 344.4 691 38.6
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.1e-92 344.4 754 36.5
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 2.7e-92 344.0 685 40.4
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.7e-92 344.0 687 39.2
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 2.8e-89 334.0 617 39.1
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 1.1e-88 332.0 695 39.0
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 1.5e-87 328.2 524 42.6
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 6.0e-84 316.2 443 44.0
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 2.5e-82 310.8 613 39.2
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 6.2e-81 306.2 700 37.3
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 2.4e-80 304.3 754 34.5
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 4.0e-80 303.5 737 34.5
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 4.0e-80 303.5 439 41.7
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 9.0e-80 302.4 695 36.1
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.3e-78 298.5 691 36.6
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 1.7e-78 298.1 756 36.0
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.4e-77 295.0 591 36.7
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 1.2e-76 292.0 599 36.4
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.6e-76 291.6 445 42.0
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 1.3e-75 288.5 605 37.0
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 3.9e-75 287.0 585 37.4
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 9.0e-72 275.8 586 35.7
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 1.5e-71 275.0 579 37.0
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 7.6e-71 272.7 659 34.9
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 4.6e-68 263.5 582 36.4
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.9e-66 258.1 559 36.1
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 1.3e-65 255.4 569 35.5
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 1.3e-65 255.4 569 35.9
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 6.2e-65 253.1 569 35.3
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 1.4e-64 251.9 569 35.3
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 6.9e-64 249.6 569 35.1
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 5.8e-63 246.5 572 35.3
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 5.0e-62 243.4 543 35.4
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.0e-59 235.7 616 35.6
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 3.0e-59 234.2 621 35.7
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 8.5e-46 189.5 231 48.1
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 4.5e-39 167.2 452 33.4
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 3.6e-36 157.5 581 28.6
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 2.0e-34 151.8 454 33.7
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 3.3e-34 151.0 248 41.5
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 5.7e-34 150.2 485 30.7
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 2.2e-33 148.3 556 29.0
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.4e-24 119.0 161 50.9
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 2.9e-14 84.7 166 34.3
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 8.0e-12 76.6 206 31.6
SEGI_39127 Sequoiadendron giganteum HOM05D006267 ORTHO05D007490 4.0e-11 74.3 252 27.0
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.0e-10 72.0 80 47.5
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.6e-10 71.6 303 28.4
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 9.2e-08 63.2 512 24.8


User provided reference genes

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