Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 9.4e-150 533.5 267 100.0
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 1.7e-82 310.1 256 64.8
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 4.2e-81 305.4 256 60.5
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 6.0e-80 301.6 256 62.9
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 1.1e-78 297.4 256 62.5
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 2.1e-77 293.1 256 60.5
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 5.3e-76 288.5 256 62.5
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 1.2e-75 287.3 256 62.1
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 4.4e-75 285.4 258 60.1
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 7.6e-75 284.6 256 61.7
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 7.6e-75 284.6 256 59.4
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 1.4e-73 280.4 256 59.8
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 7.1e-73 278.1 256 57.8
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 7.1e-73 278.1 252 59.1
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 7.1e-73 278.1 256 59.4
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 9.3e-73 277.7 256 59.4
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 9.3e-73 277.7 256 59.4
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 9.3e-73 277.7 256 58.6
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 2.7e-72 276.2 256 59.0
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 3.0e-71 272.7 256 58.6
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 3.9e-71 272.3 256 55.1
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 3.9e-71 272.3 257 58.8
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 1.1e-70 270.8 257 59.5
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 2.8e-69 266.2 256 56.2
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 3.6e-69 265.8 256 57.4
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 6.2e-69 265.0 257 56.8
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 3.1e-68 262.7 256 56.6
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 5.3e-68 261.9 258 55.4
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 6.9e-68 261.5 256 54.3
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 2.6e-67 259.6 256 55.9
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 3.4e-67 259.2 256 54.7
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 3.4e-67 259.2 256 55.1
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 2.2e-66 256.5 256 54.3
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 4.9e-66 255.4 256 55.1
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 1.1e-65 254.2 256 55.5
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 1.1e-65 254.2 251 53.8
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.4e-65 253.8 256 54.3
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 7.1e-65 251.5 256 55.1
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 1.2e-64 250.8 256 54.3
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.6e-64 250.4 257 54.5
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 4.6e-64 248.8 256 52.7
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.0e-63 247.7 256 53.9
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 1.8e-63 246.9 256 56.2
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 2.3e-63 246.5 258 54.3
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 3.0e-63 246.1 257 54.1
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 6.7e-63 245.0 267 52.4
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 8.7e-63 244.6 256 52.7
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 1.5e-62 243.8 257 53.3
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.5e-62 243.8 256 53.9
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 3.3e-62 242.7 256 53.9
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 5.6e-62 241.9 256 53.5
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.6e-61 240.4 256 53.1
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 2.1e-61 240.0 256 53.1
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 3.7e-61 239.2 256 52.7
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 3.7e-61 239.2 256 53.1
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 6.2e-61 238.4 256 52.7
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 2.4e-60 236.5 256 52.3
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 2.4e-60 236.5 256 50.8
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 5.3e-60 235.3 256 52.3
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 5.8e-59 231.9 256 50.8
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 6.5e-58 228.4 257 52.5
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 3.2e-57 226.1 256 49.6
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 4.2e-57 225.7 256 50.8
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 9.3e-57 224.6 258 50.0
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 1.2e-56 224.2 256 48.8
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 2.7e-56 223.0 257 51.0
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 2.7e-56 223.0 258 50.0
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 1.1e-54 217.6 256 49.2
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 1.9e-54 216.9 256 50.4
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 4.3e-54 215.7 256 48.8
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 5.7e-54 215.3 256 48.4
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 6.3e-53 211.8 240 52.1
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 1.4e-52 210.7 256 49.6
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.3e-50 204.1 233 50.6
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 2.9e-50 203.0 258 46.9
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 3.8e-50 202.6 267 43.8
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.2e-48 197.6 257 47.1
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.3e-46 189.5 256 41.4
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 1.4e-44 184.1 257 43.6
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 4.3e-38 162.5 166 56.6
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.7e-37 160.6 251 41.0
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 1.7e-37 160.6 260 37.3
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 1.8e-36 157.1 171 49.7
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 4.1e-36 156.0 256 37.1
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 7.2e-33 145.2 120 67.5
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.1e-32 142.1 267 34.1
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.0e-31 141.4 161 55.9
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 8.2e-29 131.7 269 33.1
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.1e-28 129.8 256 33.2
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 7.0e-28 128.6 91 73.6
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 8.5e-26 121.7 289 31.5
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.4e-23 114.4 289 30.1
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.6e-22 110.2 234 31.6
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.5e-19 99.4 299 26.8
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 1.0e-18 98.2 96 56.2
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 1.7e-18 97.4 127 42.5
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 3.2e-17 93.2 52 80.8
Actinidia31922 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.8e-15 87.4 51 78.4
Solyc01g081280.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 6.8e-15 85.5 67 59.7
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 4.8e-13 79.3 134 36.6
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 5.4e-12 75.9 136 32.4
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.3e-10 71.2 136 30.1
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 3.2e-09 66.6 136 29.4
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.1e-08 63.9 136 29.4
CAN.G992.5 Capsicum annuum HOM05D006847 ORTHO05D008685 2.6e-06 57.0 163 28.2


User provided reference genes

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