Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 3.2e-138 495.0 234 100.0
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 1.1e-72 277.3 240 60.8
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 3.4e-71 272.3 239 60.3
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 4.9e-70 268.5 239 59.8
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 4.2e-69 265.4 239 59.8
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 3.7e-57 225.7 240 52.5
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 5.3e-56 221.9 243 51.0
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.3e-54 217.2 234 50.4
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 6.1e-52 208.4 261 47.1
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 3.7e-49 199.1 249 49.0
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 8.2e-49 198.0 243 49.4
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.2e-47 194.1 242 48.3
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 2.0e-47 193.4 252 47.2
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 6.5e-46 188.3 282 40.8
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 2.5e-45 186.4 235 48.5
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 4.2e-45 185.7 237 46.8
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 7.2e-45 184.9 284 40.5
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 3.6e-44 182.6 238 45.4
Actinidia33026 Actinidia chinensis HOM05D007349 ORTHO05D009317 1.0e-43 181.0 153 65.4
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 2.3e-43 179.9 241 46.5
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 1.1e-42 177.6 244 43.9
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 1.1e-42 177.6 252 44.0
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 1.5e-42 177.2 245 42.4
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 7.4e-42 174.9 244 42.6
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 1.7e-41 173.7 234 44.0
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.4e-40 170.6 247 42.9
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 1.4e-40 170.6 247 44.1
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 2.4e-40 169.9 291 37.5
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 3.1e-40 169.5 173 52.0
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 6.9e-40 168.3 245 40.8
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 9.1e-40 167.9 247 43.7
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 2.6e-39 166.4 235 43.8
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 3.4e-39 166.0 246 43.5
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 3.4e-39 166.0 240 45.0
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 7.7e-39 164.9 243 40.3
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 1.0e-38 164.5 258 40.3
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.0e-38 164.5 220 46.4
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 1.7e-38 163.7 230 43.5
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 2.9e-38 162.9 244 45.9
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 6.5e-38 161.8 192 48.4
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 1.4e-37 160.6 259 42.5
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 1.9e-37 160.2 244 43.0
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 2.5e-37 159.8 239 41.0
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 5.5e-37 158.7 238 42.4
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 1.2e-36 157.5 239 39.7
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 2.1e-36 156.8 235 39.6
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 1.4e-35 154.1 242 40.9
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 1.8e-35 153.7 245 40.8
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 3.0e-35 152.9 240 38.3
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 3.9e-35 152.5 240 37.5
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 1.5e-34 150.6 251 40.2
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 5.7e-34 148.7 247 40.1
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 2.8e-33 146.4 264 35.6
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 2.4e-32 143.3 260 38.1
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 2.0e-31 140.2 241 37.8
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 2.0e-31 140.2 242 37.6
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 3.5e-31 139.4 240 36.7
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 5.9e-31 138.7 250 38.4
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 5.9e-31 138.7 240 37.1
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 1.1e-29 134.4 269 36.8
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 4.7e-28 129.0 218 39.9
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 6.1e-28 128.6 252 34.9
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 1.8e-27 127.1 272 33.5
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 2.3e-27 126.7 262 35.9
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 4.0e-27 125.9 270 33.0
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 5.2e-27 125.6 238 37.4
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 6.7e-27 125.2 229 35.8
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 6.7e-27 125.2 239 34.7
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 8.8e-27 124.8 182 42.9
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 3.3e-26 122.9 270 34.4
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 7.5e-26 121.7 265 34.3
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 1.7e-25 120.6 264 34.1
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 1.7e-25 120.6 235 35.3
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 2.2e-25 120.2 82 64.6
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 4.8e-25 119.0 265 34.3
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 8.2e-25 118.2 268 34.7
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 1.8e-24 117.1 273 35.2
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 2.4e-24 116.7 268 34.7
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 7.0e-24 115.2 273 34.8
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 2.0e-23 113.6 98 52.0
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 4.5e-23 112.5 231 34.6
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 5.9e-23 112.1 277 32.9
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 5.9e-23 112.1 268 32.8
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 1.7e-22 110.5 295 30.2
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 5.0e-22 109.0 90 57.8
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 2.5e-21 106.7 124 48.4
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 2.5e-21 106.7 92 58.7
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 2.5e-21 106.7 87 60.9
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 5.5e-21 105.5 166 36.1
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 4.7e-20 102.4 92 53.3
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 5.2e-19 99.0 205 36.6
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 3.1e-16 89.7 97 45.4
Peaxi162Scf00938g00313 Petunia axillaris HOM05D007349 ORTHO05D009317 1.6e-15 87.4 140 42.1
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 1.3e-14 84.3 200 33.5
Sopen00g011340 Solanum pennellii HOM05D007349 ORTHO05D009317 1.3e-14 84.3 144 41.7
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 2.9e-14 83.2 254 31.5
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 2.5e-13 80.1 61 59.0
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 9.8e-10 68.2 93 38.7
Glyma.20G197900 Glycine max HOM05D007349 ORTHO05D009317 3.1e-08 63.2 149 34.2
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 3.1e-08 63.2 118 37.3
Sc13g0000070 Simmondsia chinensis HOM05D007349 ORTHO05D009317 2.0e-07 60.5 161 33.5


User provided reference genes

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