Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-191 672.9 337 100.0
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.4e-179 630.9 354 91.8
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.1e-179 630.6 354 91.2
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.2e-172 609.0 356 89.6
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-169 599.0 340 90.6
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.5e-152 542.3 354 77.1
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.5e-152 542.3 354 77.1
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.8e-151 538.9 354 81.4
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.5e-131 473.4 357 65.3
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 2.5e-131 472.6 350 68.9
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 6.1e-130 468.0 348 70.4
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 2.8e-127 459.1 357 67.5
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 8.3e-127 457.6 357 66.9
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 8.3e-127 457.6 364 66.2
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 2.9e-124 449.1 346 65.9
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.1e-123 447.2 362 64.4
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 9.4e-123 444.1 347 66.0
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 2.1e-122 443.0 360 64.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.6e-122 442.2 359 65.7
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 1.8e-121 439.9 356 64.9
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.2e-120 437.2 357 66.1
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 3.4e-120 435.6 354 65.3
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 7.5e-120 434.5 348 62.6
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.7e-119 433.3 352 61.6
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.2e-119 433.0 363 61.2
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 4.9e-119 431.8 347 65.7
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 8.3e-119 431.0 350 64.9
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.4e-118 430.3 352 61.4
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 2.4e-118 429.5 350 61.1
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 4.1e-118 428.7 385 60.8
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 7.0e-118 427.9 356 64.3
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.6e-117 426.8 344 64.2
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.6e-117 426.8 362 61.0
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.6e-117 426.8 362 61.0
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.0e-117 426.4 356 62.9
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 5.9e-117 424.9 348 64.1
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.9e-116 422.5 348 63.5
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 8.6e-116 421.0 344 64.5
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.1e-115 420.6 348 63.8
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.1e-115 420.6 356 62.1
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.9e-115 419.9 362 61.0
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.9e-115 419.9 362 61.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.5e-115 419.5 356 61.8
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 4.2e-115 418.7 355 63.4
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 4.2e-115 418.7 356 62.1
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 7.2e-115 417.9 362 60.8
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 9.5e-115 417.5 348 62.9
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.4e-113 413.7 348 62.4
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.8e-113 413.3 356 61.5
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.3e-113 412.9 348 62.9
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 2.3e-113 412.9 359 62.7
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 2.3e-113 412.9 345 62.9
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 3.4e-112 409.1 360 58.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 3.4e-112 409.1 345 62.6
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 3.4e-112 409.1 352 63.4
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.3e-111 407.1 356 61.0
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 1.7e-111 406.8 336 63.7
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 2.2e-111 406.4 350 62.6
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.9e-111 406.0 368 56.8
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 6.4e-111 404.8 359 61.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 5.4e-110 401.7 354 62.4
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.2e-109 400.6 373 58.2
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 4.6e-109 398.7 353 58.9
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 3.6e-106 389.0 356 58.4
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 4.7e-106 388.7 346 57.5
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 6.2e-106 388.3 364 58.8
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 8.0e-106 387.9 352 59.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 8.9e-105 384.4 354 56.2
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 7.5e-104 381.3 329 61.1
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.2e-103 379.8 358 56.7
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.9e-103 379.4 356 56.7
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.9e-103 379.4 370 56.5
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.7e-103 379.0 358 56.7
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 4.9e-103 378.6 356 57.3
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 6.4e-103 378.3 352 57.7
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 6.4e-103 378.3 367 56.9
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.1e-102 377.5 352 58.2
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 1.9e-102 376.7 367 55.6
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 3.2e-102 375.9 358 56.4
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 9.2e-102 374.4 355 56.6
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 2.0e-101 373.2 353 57.5
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 3.5e-101 372.5 359 56.0
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.9e-99 366.7 360 56.4
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 5.6e-99 365.2 357 54.9
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 5.6e-99 365.2 350 55.1
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.0e-96 356.7 335 59.4
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.7e-95 353.6 355 55.5
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.9e-95 352.8 335 57.6
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 8.3e-95 351.3 335 57.0
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 8.3e-95 351.3 335 57.3
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 1.2e-93 347.4 334 57.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.5e-91 340.5 360 54.4
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 5.6e-91 338.6 338 54.4
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.9e-89 331.3 194 89.2
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-87 327.4 194 89.2
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-86 323.6 194 88.7
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 9.6e-83 311.2 250 64.0
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 2.1e-82 310.1 227 68.7
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.1e-81 307.8 235 67.7
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 3.8e-71 272.7 352 46.6
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 1.2e-69 267.7 345 46.4
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 5.1e-68 262.3 225 63.1
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 4.3e-67 259.2 280 51.8
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 5.3e-65 252.3 349 39.3
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 4.2e-62 242.7 148 76.4
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-58 231.1 120 95.0
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.8e-58 229.2 192 66.7
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 4.8e-58 229.2 206 62.1
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 1.1e-57 228.0 371 36.9
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.3e-55 221.1 194 62.9
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.4e-54 217.6 199 56.3
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 6.0e-53 212.2 146 74.0
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 5.9e-48 195.7 313 39.6
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 6.7e-44 182.2 162 54.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 4.6e-37 159.5 377 29.4
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 1.7e-34 151.0 241 41.1
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-27 126.7 66 97.0
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.8e-25 120.9 144 41.7
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.1e-25 119.8 66 90.9
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.7e-21 106.3 66 84.8
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 1.2e-11 75.1 56 60.7
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 2.6e-11 73.9 52 63.5
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.3e-10 71.6 53 64.2
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.3e-10 71.6 53 64.2
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.3e-10 71.6 53 64.2
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 2.8e-10 70.5 56 60.7
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 3.7e-10 70.1 57 57.9
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 4.5e-08 63.2 115 39.1
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 2.5e-06 57.4 49 57.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 2.5e-06 57.4 49 57.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 2.5e-06 57.4 49 57.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 2.5e-06 57.4 49 57.1


User provided reference genes

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