Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029741 Camellia sinensis var. sinensis HOM05D008520 ORTHO05D009890 2.8e-79 298.5 149 100.0
vmacro02158 Vaccinium macrocarpon HOM05D008520 ORTHO05D009890 2.1e-13 79.7 86 54.7
Thecc.02G029000 Theobroma cacao HOM05D008520 ORTHO05D009890 6.2e-10 68.2 78 47.4
Glyma.11G123300 Glycine max HOM05D008520 ORTHO05D009890 3.1e-09 65.9 78 48.7
Potri.004G148200 Populus trichocarpa HOM05D008520 ORTHO05D009890 4.0e-09 65.5 80 47.5
Ciclev10029756m.g Citrus clementina HOM05D008520 ORTHO05D009890 1.5e-08 63.5 79 48.1
Ciclev10029754m.g Citrus clementina HOM05D008520 ORTHO05D009890 2.0e-08 63.2 78 44.9
arahy.Tifrunner.gnm1.ann1.4L7A6H Arachis hypogaea HOM05D008520 ORTHO05D009890 5.8e-08 61.6 83 45.8
arahy.Tifrunner.gnm1.ann1.H0FE8D Arachis hypogaea HOM05D008520 ORTHO05D009890 5.8e-08 61.6 83 45.8
Lalb_Chr01g0002971 Lupinus albus HOM05D008520 ORTHO05D009890 9.9e-08 60.8 84 48.8
Potri.009G109300 Populus trichocarpa HOM05D008520 ORTHO05D009890 9.9e-08 60.8 76 46.1
FAN24G0814 Fragaria x ananassa HOM05D008520 ORTHO05D009890 2.2e-07 59.7 90 41.1
Lj3g0002198 Lotus japonicus HOM05D008520 ORTHO05D009890 2.2e-07 59.7 80 46.2
Phvul.011G050000 Phaseolus vulgaris HOM05D008520 ORTHO05D009890 2.2e-07 59.7 80 47.5
Solyc01g109100.2 Solanum lycopersicum HOM05D013381 ORTHO05D016352 3.8e-07 58.9 78 44.9
FAN05G4777 Fragaria x ananassa HOM05D008520 ORTHO05D009890 4.9e-07 58.5 90 40.0
FAN15G0381 Fragaria x ananassa HOM05D008520 ORTHO05D009890 4.9e-07 58.5 90 40.0
FAN20G0555 Fragaria x ananassa HOM05D008520 ORTHO05D009890 4.9e-07 58.5 90 40.0
PGSC0003DMG400025954 Solanum tuberosum HOM05D013381 ORTHO05D016352 4.9e-07 58.5 78 43.6
COL.COLO4_17779 Corchorus olitorius HOM05D008520 ORTHO05D009890 6.4e-07 58.2 79 43.0
Eucgr.G01538 Eucalyptus grandis HOM05D012043 ORTHO05D009890 6.4e-07 58.2 80 43.8
Manes.15G145900 Manihot esculenta HOM05D008520 ORTHO05D009890 6.4e-07 58.2 82 42.7
Eucgr.G00500 Eucalyptus grandis HOM05D012043 ORTHO05D009890 8.4e-07 57.8 80 43.8
Eucgr.G00503 Eucalyptus grandis HOM05D012043 ORTHO05D009890 8.4e-07 57.8 80 43.8
FvH4_2g07390 Fragaria vesca HOM05D008520 ORTHO05D009890 8.4e-07 57.8 88 40.9
Gohir.D01G172800 Gossypium hirsutum HOM05D008520 ORTHO05D009890 1.1e-06 57.4 79 43.0
Gohir.D02G235600 Gossypium hirsutum HOM05D008520 ORTHO05D009890 1.1e-06 57.4 78 39.7
Gorai.002G214400 Gossypium raimondii HOM05D008520 ORTHO05D009890 1.1e-06 57.4 79 43.0
Gorai.005G263700 Gossypium raimondii HOM05D008520 ORTHO05D009890 1.1e-06 57.4 78 39.7
PGSC0003DMG400025953 Solanum tuberosum HOM05D013381 ORTHO05D016352 1.1e-06 57.4 78 42.3
Atru.chr5.2895 Acer truncatum HOM05D008520 ORTHO05D009890 1.4e-06 57.0 78 39.7
Gohir.A03G214100 Gossypium hirsutum HOM05D008520 ORTHO05D009890 1.4e-06 57.0 78 38.5
Haze_02458 Corylus avellana HOM05D008520 ORTHO05D009890 1.9e-06 56.6 79 43.0
Medtr4g068560 Medicago truncatula HOM05D008520 ORTHO05D009890 1.9e-06 56.6 80 42.5
QL11p039275 Quercus lobata HOM05D008520 ORTHO05D009890 1.9e-06 56.6 80 37.5
Cfa004952 Carpinus fangiana HOM05D008520 ORTHO05D009890 3.2e-06 55.8 78 39.7
Glyma.12G048000 Glycine max HOM05D008520 ORTHO05D009890 3.2e-06 55.8 80 42.5
TAR628G1249 Trochodendron aralioides HOM05D008520 ORTHO05D009890 3.2e-06 55.8 84 39.3
Atru.chr5.2897 Acer truncatum HOM05D008520 ORTHO05D009890 4.2e-06 55.5 79 41.8
RcHm_v2.0_Chr6g0260831 Rosa chinensis HOM05D008520 ORTHO05D009890 4.2e-06 55.5 89 39.3
Gohir.A01G181700 Gossypium hirsutum HOM05D008520 ORTHO05D009890 5.5e-06 55.1 79 40.5
DCAR_003630 Daucus carota HOM05D059812 ORTHO05D009890 7.1e-06 54.7 81 40.7
Medtr1g034290 Medicago truncatula HOM05D008520 ORTHO05D009890 7.1e-06 54.7 79 39.2
Peaxi162Scf00016g01230 Petunia axillaris HOM05D013381 ORTHO05D016352 7.1e-06 54.7 75 44.0
Eucgr.G00506 Eucalyptus grandis HOM05D012043 ORTHO05D009890 9.3e-06 54.3 78 42.3
Manes.17G096900 Manihot esculenta HOM05D012043 ORTHO05D009890 9.3e-06 54.3 80 42.5
Nitab4.5_0009399g0040 Nicotiana tabacum HOM05D013381 ORTHO05D016352 9.3e-06 54.3 78 43.6


User provided reference genes

Program Settings