Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029735 Camellia sinensis var. sinensis HOM05D003847 ORTHO05D004976 2.6e-242 841.6 425 100.0
Hma1.2p1_0627F.1_g191710 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 4.1e-232 807.7 425 95.3
Actinidia02826 Actinidia chinensis HOM05D003847 ORTHO05D004976 3.6e-228 794.7 425 92.9
GSVIVG01026981001 Vitis vinifera HOM05D003847 ORTHO05D004976 1.0e-227 793.1 425 93.2
COL.COLO4_12761 Corchorus olitorius HOM05D003847 ORTHO05D004976 5.2e-227 790.8 425 92.5
Sopen01g038710 Solanum pennellii HOM05D003847 ORTHO05D004976 1.3e-225 786.2 425 91.3
Thecc.01G354200 Theobroma cacao HOM05D003847 ORTHO05D004976 1.3e-225 786.2 425 92.5
Cc02_g38410 Coffea canephora HOM05D003847 ORTHO05D004976 2.8e-225 785.0 425 92.2
Solyc01g094930.3 Solanum lycopersicum HOM05D003847 ORTHO05D004976 2.8e-225 785.0 425 91.3
QL04p055042 Quercus lobata HOM05D003847 ORTHO05D004976 8.3e-225 783.5 424 91.7
Gohir.A11G091500 Gossypium hirsutum HOM05D003847 ORTHO05D004976 1.1e-224 783.1 425 91.8
Gorai.007G102500 Gossypium raimondii HOM05D003847 ORTHO05D004976 1.4e-224 782.7 425 91.8
CAN.G78.110 Capsicum annuum HOM05D003847 ORTHO05D004976 7.0e-224 780.4 425 91.1
Manes.05G031000 Manihot esculenta HOM05D003847 ORTHO05D004976 1.2e-223 779.6 425 90.8
Ciclev10020054m.g Citrus clementina HOM05D003847 ORTHO05D004976 1.6e-223 779.2 423 91.3
Gohir.D11G096200 Gossypium hirsutum HOM05D003847 ORTHO05D004976 2.7e-223 778.5 425 91.3
CANSAT56G2934 Cannabis sativa HOM05D003847 ORTHO05D004976 2.3e-222 775.4 425 90.6
Prupe.2G175500 Prunus persica HOM05D003847 ORTHO05D004976 2.3e-222 775.4 425 90.4
MELO3C006089.2 Cucumis melo HOM05D003847 ORTHO05D004976 2.9e-222 775.0 425 89.9
CsaV3_3G008710 Cucumis sativus L. HOM05D003847 ORTHO05D004976 4.3e-221 771.2 425 88.9
Nn1g01640 Nelumbo nucifera HOM05D003847 ORTHO05D004976 1.2e-220 769.6 425 89.4
DCAR_025211 Daucus carota HOM05D003847 ORTHO05D004976 1.6e-220 769.2 425 89.2
PGR042G1058 Punica granatum HOM05D003847 ORTHO05D004976 1.6e-220 769.2 425 89.4
Sed0007018 Sechium edule HOM05D003847 ORTHO05D004976 2.1e-220 768.8 425 88.5
Migut.N01455 Erythranthe guttata HOM05D003847 ORTHO05D004976 2.8e-220 768.5 425 89.4
HanXRQChr17g0562361 Helianthus annuus HOM05D003847 ORTHO05D004976 2.8e-220 768.5 425 90.1
CiPaw.01G065300 Carya illinoinensis HOM05D003847 ORTHO05D004976 8.0e-220 766.9 425 89.2
TWI59G0695 Tripterygium wilfordii HOM05D003847 ORTHO05D004976 1.0e-219 766.5 425 88.7
Lj9C587T13 Lonicera japonica HOM05D003847 ORTHO05D004976 2.3e-219 765.4 425 91.3
Potri.014G088900 Populus trichocarpa HOM05D003847 ORTHO05D004976 8.9e-219 763.5 425 89.6
ECA234G3268 Erigeron canadensis HOM05D003847 ORTHO05D004976 1.5e-218 762.7 424 88.9
MD01G1069400 Malus domestica HOM05D003847 ORTHO05D004976 1.5e-218 762.7 425 89.2
Duzib133G1387 Durio zibethinus HOM05D003847 ORTHO05D004976 2.6e-218 761.9 417 90.4
Potri.002G162700 Populus trichocarpa HOM05D003847 ORTHO05D004976 2.6e-218 761.9 425 89.4
Glyma.18G237300 Glycine max HOM05D003847 ORTHO05D004976 3.4e-218 761.5 425 88.9
DCAR_008629 Daucus carota HOM05D003847 ORTHO05D004976 4.4e-218 761.1 425 88.2
arahy.Tifrunner.gnm1.ann1.9YV9D4 Arachis hypogaea HOM05D003847 ORTHO05D004976 5.7e-218 760.8 423 89.1
Lalb_Chr04g0259201 Lupinus albus HOM05D003847 ORTHO05D004976 5.7e-218 760.8 425 88.5
Eucgr.D02317 Eucalyptus grandis HOM05D003847 ORTHO05D004976 9.8e-218 760.0 425 89.4
VMungo1383G0817 Vigna mungo HOM05D003847 ORTHO05D004976 9.8e-218 760.0 425 87.5
SGA_v2.0_scaffold43G16402 Striga asiatica HOM05D003847 ORTHO05D004976 2.2e-217 758.8 425 87.3
Glyma.09G255600 Glycine max HOM05D003847 ORTHO05D004976 3.7e-217 758.1 425 88.2
FAN10G2219 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.4e-217 757.3 424 88.2
FAN10G1372 Fragaria x ananassa HOM05D003847 ORTHO05D004976 8.3e-217 756.9 424 88.2
Hund16669 Selenicereus undatus HOM05D003847 ORTHO05D004976 8.3e-217 756.9 426 89.0
arahy.Tifrunner.gnm1.ann1.P1PLPP Arachis hypogaea HOM05D003847 ORTHO05D004976 1.1e-216 756.5 423 88.7
Phvul.008G059300 Phaseolus vulgaris HOM05D003847 ORTHO05D004976 2.4e-216 755.4 425 87.3
RcHm_v2.0_Chr1g0357201 Rosa chinensis HOM05D003847 ORTHO05D004976 2.4e-216 755.4 425 88.2
FAN06G3510 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.2e-216 755.0 424 88.2
AUR62004399 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.0e-215 752.3 426 87.1
AUR62022605 Chenopodium quinoa HOM05D003847 ORTHO05D004976 2.0e-215 752.3 426 87.3
Ca_00820_v3 Cicer arietinum L. HOM05D003847 ORTHO05D004976 2.0e-215 752.3 421 88.4
Lj1g0024026 Lotus japonicus HOM05D003847 ORTHO05D004976 2.0e-215 752.3 425 86.8
Lsat_1_v5_gn_4_34641 Lactuca sativa HOM05D003847 ORTHO05D004976 5.9e-215 750.7 425 87.3
THA.LOC104817033 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 1.0e-214 750.0 422 88.2
Medtr7g078760 Medicago truncatula HOM05D003847 ORTHO05D004976 6.6e-214 747.3 423 87.5
Sabra02G0147800 Salix brachista HOM05D003847 ORTHO05D004976 1.1e-213 746.5 449 84.6
C03p39000 Brassica napus HOM05D003847 ORTHO05D004976 1.9e-213 745.7 425 87.5
BolC3t16172H Brassica oleracea HOM05D003847 ORTHO05D004976 1.9e-213 745.7 425 87.5
Thhalv10028603m.g Eutrema salsugineum HOM05D003847 ORTHO05D004976 1.9e-213 745.7 425 88.0
A09p00040 Brassica napus HOM05D003847 ORTHO05D004976 5.6e-213 744.2 425 87.3
BraA03t12370Z Brassica rapa HOM05D003847 ORTHO05D004976 5.6e-213 744.2 425 87.3
BraA09t35735Z Brassica rapa HOM05D003847 ORTHO05D004976 7.3e-213 743.8 425 87.1
CDE11G0931 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 7.3e-213 743.8 425 85.9
FAN03G1748 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.2e-212 743.0 438 85.2
BolC9t53000H Brassica oleracea HOM05D003847 ORTHO05D004976 2.1e-212 742.3 425 86.6
MSTRG.28227 Avicennia marina HOM05D003847 ORTHO05D004976 2.8e-212 741.9 425 87.5
EL10Ac1g00369 Beta vulgaris HOM05D003847 ORTHO05D004976 2.8e-212 741.9 438 85.4
BcaC04g24142 Brassica carinata HOM05D003847 ORTHO05D004976 3.6e-212 741.5 425 86.6
C09p00660 Brassica napus HOM05D003847 ORTHO05D004976 3.6e-212 741.5 425 86.6
Sp6g00820 Schrenkiella parvula HOM05D003847 ORTHO05D004976 6.2e-212 740.7 425 87.3
ATR0661G289 Amborella trichopoda HOM05D003847 ORTHO05D004976 8.0e-212 740.3 425 84.9
THA.LOC104825858 Tarenaya hassleriana HOM05D003847 ORTHO05D004976 8.0e-212 740.3 425 86.8
FAN01G0997 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.4e-211 739.6 414 88.9
BcaB01g02153 Brassica carinata HOM05D003847 ORTHO05D004976 1.8e-211 739.2 420 87.6
Aqoxy5G04080 Aquilegia oxysepala HOM05D003847 ORTHO05D004976 2.3e-211 738.8 425 85.6
AT4G01320 Arabidopsis thaliana HOM05D003847 ORTHO05D004976 4.0e-211 738.0 425 87.3
CARHR249000 Cardamine hirsuta HOM05D003847 ORTHO05D004976 4.0e-211 738.0 425 87.3
Sabra14G0064600 Salix brachista HOM05D003847 ORTHO05D004976 4.0e-211 738.0 415 88.4
BcaC01g06856 Brassica carinata HOM05D003847 ORTHO05D004976 5.2e-211 737.6 420 87.6
Sc26g0000820 Simmondsia chinensis HOM05D003847 ORTHO05D004976 5.2e-211 737.6 425 86.4
BcaB01g02281 Brassica carinata HOM05D003847 ORTHO05D004976 6.8e-211 737.3 425 86.4
Carub.0006s3638 Capsella rubella HOM05D003847 ORTHO05D004976 1.2e-210 736.5 425 87.1
Sabra02G0148200 Salix brachista HOM05D003847 ORTHO05D004976 1.7e-209 732.6 471 80.7
TPR.G22298 Trifolium pratense HOM05D003847 ORTHO05D004976 2.2e-209 732.3 423 86.1
CDE09G0314 Ceratophyllum demersum HOM05D003847 ORTHO05D004976 2.9e-209 731.9 425 84.5
A03p31980 Brassica napus HOM05D003847 ORTHO05D004976 4.1e-208 728.0 415 87.2
AL6G52080 Arabidopsis lyrata HOM05D003847 ORTHO05D004976 1.9e-205 719.2 413 87.7
Dinv43851 Davidia involucrata HOM05D003847 ORTHO05D004976 1.8e-203 712.6 425 85.4
PSO478G2530 Papaver somniferum HOM05D003847 ORTHO05D004976 2.3e-203 712.2 423 82.7
Os02g0680400 Oryza sativa ssp. japonica HOM05D003847 ORTHO05D004976 4.0e-203 711.4 424 81.6
FAN10G0014 Fragaria x ananassa HOM05D003847 ORTHO05D004976 6.8e-203 710.7 425 81.4
Atru.chr5.1381 Acer truncatum HOM05D003847 ORTHO05D004976 8.9e-203 710.3 420 82.1
PSO782G0912 Papaver somniferum HOM05D003847 ORTHO05D004976 8.9e-203 710.3 423 82.5
Zm00001eb187240 Zea mays HOM05D003847 ORTHO05D004976 2.0e-202 709.1 426 82.2
RcHm_v2.0_Chr1g0357211 Rosa chinensis HOM05D003847 ORTHO05D004976 4.4e-202 708.0 425 81.4
FvH4_7g15083 Fragaria vesca HOM05D003847 ORTHO05D004976 1.3e-201 706.4 425 81.4
Duzib138G0396 Durio zibethinus HOM05D003847 ORTHO05D004976 5.4e-200 701.0 425 84.0
Haze_15549 Corylus avellana HOM05D003847 ORTHO05D004976 8.6e-198 693.7 425 82.6
ClCG05G001330 Citrullus lanatus HOM05D003847 ORTHO05D004976 7.3e-197 690.6 425 81.6
Nitab4.5_0003779g0180 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.8e-196 688.7 425 82.6
SEGI_36957 Sequoiadendron giganteum HOM05D003847 ORTHO05D004976 1.8e-195 686.0 423 79.0
Nitab4.5_0001702g0130 Nicotiana tabacum HOM05D003847 ORTHO05D004976 4.0e-195 684.9 433 81.8
Oeu036597.2 Olea europaea HOM05D003847 ORTHO05D004976 8.9e-195 683.7 611 62.2
MBI04_g26959_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D004976 2.0e-194 682.6 425 80.9
FAN03G0710 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.4e-194 681.8 419 80.0
vmacro20904 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 5.8e-194 681.0 418 83.0
SalBow5G2471 Salvia bowleyana HOM05D003847 ORTHO05D004976 1.9e-192 676.0 442 79.0
Oeu015226.2 Olea europaea HOM05D003847 ORTHO05D004976 7.1e-192 674.1 413 83.1
TAR629G0433 Trochodendron aralioides HOM05D003847 ORTHO05D004976 6.0e-191 671.0 416 81.0
Nitab4.5_0001269g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 1.1e-189 666.8 415 81.4
Mapoly0151s0045 Marchantia polymorpha HOM05D003847 ORTHO05D004976 1.5e-189 666.4 423 76.6
AagrBONN_evm.TU.Sc2ySwM_344.5530 Anthoceros agrestis HOM05D003847 ORTHO05D004976 1.9e-189 666.0 420 77.6
Nitab4.5_0011900g0010 Nicotiana tabacum HOM05D003847 ORTHO05D004976 2.5e-189 665.6 475 74.5
Pp3c4_3300 Physcomitrium patens HOM05D003847 ORTHO05D004976 2.5e-189 665.6 423 76.4
Cfa003885 Carpinus fangiana HOM05D003847 ORTHO05D004976 1.2e-186 656.8 401 82.5
Pp3c12_25070 Physcomitrium patens HOM05D003847 ORTHO05D004976 4.4e-186 654.8 423 74.9
arahy.Tifrunner.gnm1.ann1.W45FS6 Arachis hypogaea HOM05D003847 ORTHO05D004976 1.7e-185 652.9 423 79.2
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 1.5e-181 639.8 423 74.9
FAN10G3576 Fragaria x ananassa HOM05D003847 ORTHO05D004976 7.3e-181 637.5 416 75.5
Dinv32510 Davidia involucrata HOM05D003847 ORTHO05D004976 1.8e-179 632.9 357 89.9
TAR375G0471 Trochodendron aralioides HOM05D003847 ORTHO05D004976 3.1e-179 632.1 353 87.5
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.2e-178 630.2 413 76.0
Psat3g106680 Pisum sativum HOM05D003847 ORTHO05D004976 3.4e-178 628.6 364 85.4
SMO364G0773 Selaginella moellendorffii HOM05D003847 ORTHO05D004976 3.4e-178 628.6 425 71.5
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.8e-178 627.9 406 76.6
HanXRQChr16g0521851 Helianthus annuus HOM05D003847 ORTHO05D004976 1.2e-175 620.2 410 76.1
RcHm_v2.0_Chr1g0357271 Rosa chinensis HOM05D003847 ORTHO05D004976 2.3e-174 615.9 411 74.9
vmacro04325 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 5.6e-173 611.3 432 73.1
FAN06G4922 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.7e-172 608.6 413 74.1
HanXRQChr16g0521861 Helianthus annuus HOM05D003847 ORTHO05D004976 4.8e-172 608.2 430 71.9
Atru.chr5.547 Acer truncatum HOM05D003847 ORTHO05D004976 1.5e-170 603.2 344 84.9
FvH4_7g15081 Fragaria vesca HOM05D003847 ORTHO05D004976 2.0e-170 602.8 339 87.9
Sed0024082 Sechium edule HOM05D003847 ORTHO05D004976 7.6e-170 600.9 340 87.4
Peaxi162Scf00020g01122 Petunia axillaris HOM05D003847 ORTHO05D004976 8.7e-166 587.4 415 74.0
FAN10G3432 Fragaria x ananassa HOM05D003847 ORTHO05D004976 3.4e-162 575.5 403 70.7
CBR_g23782 Chara braunii HOM05D003847 ORTHO05D004976 1.1e-157 560.5 422 63.5
HPP92_022235 Vanilla planifolia HOM05D003847 ORTHO05D004976 1.4e-155 553.5 314 88.2
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.7e-153 546.6 399 69.7
Aa31LG5G720 Aethionema arabicum HOM05D003847 ORTHO05D004976 2.2e-148 529.6 303 86.1
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 4.2e-144 515.4 413 65.9
QL12p031965 Quercus lobata HOM05D003847 ORTHO05D004976 1.6e-143 513.5 422 61.4
arahy.Tifrunner.gnm1.ann1.U13Q33 Arachis hypogaea HOM05D003847 ORTHO05D004976 2.0e-138 496.5 282 86.9
TAR636G3069 Trochodendron aralioides HOM05D003847 ORTHO05D004976 5.2e-134 481.9 286 82.2
Medtr8g028680 Medicago truncatula HOM05D003847 ORTHO05D004976 4.4e-133 478.8 442 59.0
Hund27252 Selenicereus undatus HOM05D003847 ORTHO05D004976 2.6e-130 469.5 436 58.3
MSTRG.4846 Avicennia marina HOM05D003847 ORTHO05D004976 3.2e-120 436.0 237 90.7
Cre07.g356150 Chlamydomonas reinhardtii HOM05D003847 ORTHO05D004976 4.8e-116 422.2 431 52.2
Psat2g071920 Pisum sativum HOM05D003847 ORTHO05D004976 5.4e-107 392.1 252 77.0
PRCOL_00003828 Prasinoderma coloniale HOM05D003847 ORTHO05D004976 1.8e-102 377.1 433 47.6
vmacro05292 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 6.0e-98 362.1 465 46.7
Cpa.g.sc184.22 Carica papaya HOM05D003847 ORTHO05D004976 5.6e-88 328.9 171 93.0
Gohir.A13G099905 Gossypium hirsutum HOM05D003847 ORTHO05D004976 6.2e-87 325.5 199 81.9
Haze_26886 Corylus avellana HOM05D003847 ORTHO05D004976 1.6e-82 310.8 410 41.5
vmacro05290 Vaccinium macrocarpon HOM05D003847 ORTHO05D004976 7.1e-75 285.4 239 63.2
unitig_22.g6721 Utricularia gibba HOM05D001167 ORTHO05D001054 7.8e-74 282.0 155 86.5
Psat1g001760 Pisum sativum HOM05D003847 ORTHO05D004976 1.2e-71 274.6 168 80.4
Hma1.2p1_0456F.1_g156440 Hydrangea macrophylla HOM05D003847 ORTHO05D004976 1.1e-70 271.6 166 82.5
SalBow5G1235 Salvia bowleyana HOM05D003847 ORTHO05D004976 2.4e-62 243.8 253 57.7
Atru.chr12.614 Acer truncatum HOM05D003847 ORTHO05D004976 1.3e-57 228.0 161 70.2
CANSAT25G3593 Cannabis sativa HOM05D003847 ORTHO05D004976 7.4e-56 222.2 158 72.8
RcHm_v2.0_Chr3g0493601 Rosa chinensis HOM05D003847 ORTHO05D004976 5.0e-36 156.4 96 80.2
Mapoly1163s0001 Marchantia polymorpha HOM05D003847 ORTHO05D026554 1.1e-32 145.2 86 80.2
CANSAT25G0211 Cannabis sativa HOM05D003847 ORTHO05D004976 5.7e-32 142.9 86 81.4
COL.COLO4_08374 Corchorus olitorius HOM05D000137 ORTHO05D000382 1.2e-29 135.2 217 40.1
SGA_v2.0_scaffold190G40413 Striga asiatica HOM05D003847 ORTHO05D004976 4.5e-29 133.3 126 60.3
TAR365G1016 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.3e-25 120.9 72 83.3
ATR0763G219 Amborella trichopoda HOM05D003847 ORTHO05D026554 2.6e-21 107.5 61 82.0
HanXRQChr14g0436691 Helianthus annuus HOM05D003847 ORTHO05D025737 1.7e-20 104.8 55 87.3
Medtr4g065940 Medicago truncatula HOM05D003847 ORTHO05D004976 9.4e-19 99.0 95 58.9
Psat5g164800 Pisum sativum HOM05D003847 ORTHO05D004976 9.4e-19 99.0 129 46.5
Lsat_1_v5_gn_8_14540 Lactuca sativa HOM05D003847 ORTHO05D005301 4.7e-18 96.7 168 39.9
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 1.3e-15 88.6 48 89.6
RcHm_v2.0_Chr1g0357221 Rosa chinensis HOM05D003847 ORTHO05D026554 1.8e-14 84.7 230 30.0
RcHm_v2.0_Chr2g0131551 Rosa chinensis HOM05D003847 ORTHO05D025737 2.4e-14 84.3 55 67.3
vmacro05291 Vaccinium macrocarpon HOM05D003847 ORTHO05D026554 1.1e-11 75.5 47 78.7
Lsat_1_v5_gn_3_43021 Lactuca sativa HOM05D003847 ORTHO05D028506 6.1e-10 69.7 94 44.7
Lsat_1_v5_gn_2_83340 Lactuca sativa HOM05D003847 ORTHO05D028506 8.0e-10 69.3 70 52.9
BcaC03g16052 Brassica carinata HOM05D003847 ORTHO05D004976 1.2e-08 65.5 38 84.2
CAN.G13.12 Capsicum annuum HOM05D002403 ORTHO05D028506 1.5e-08 65.1 42 71.4
Lsat_1_v5_gn_9_59821 Lactuca sativa HOM05D000726 ORTHO05D025737 2.0e-08 64.7 32 90.6
Lsat_1_v5_gn_8_143621 Lactuca sativa HOM05D003847 ORTHO05D028506 3.4e-08 63.9 44 70.5
CAN.G1511.3 Capsicum annuum HOM05D002403 ORTHO05D002724 2.4e-06 57.8 30 83.3


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