Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 4.4e-178 627.9 321 100.0
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 4.6e-159 564.7 335 87.2
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 1.2e-66 257.7 324 46.0
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 1.0e-65 254.6 276 51.1
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 2.3e-65 253.4 289 48.4
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 2.3e-65 253.4 292 48.3
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 1.5e-64 250.8 274 48.2
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 2.5e-64 250.0 269 51.3
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 2.5e-64 250.0 292 48.3
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 3.3e-64 249.6 309 47.2
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 5.5e-64 248.8 272 49.3
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 1.6e-63 247.3 268 50.4
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 2.1e-63 246.9 289 48.1
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 4.7e-63 245.7 270 50.4
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 4.7e-63 245.7 288 47.6
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 6.1e-63 245.4 289 47.1
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 6.1e-63 245.4 289 47.1
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 8.0e-63 245.0 276 47.8
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 1.0e-62 244.6 277 48.7
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 1.4e-62 244.2 272 47.8
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 1.4e-62 244.2 278 48.6
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 1.4e-62 244.2 273 50.2
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 3.0e-62 243.0 272 47.1
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 3.0e-62 243.0 270 50.0
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 4.0e-62 242.7 273 48.7
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 6.8e-62 241.9 272 46.7
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 8.9e-62 241.5 280 46.8
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 8.9e-62 241.5 272 50.4
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 1.5e-61 240.7 273 47.3
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 2.0e-61 240.4 269 49.4
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 2.6e-61 240.0 277 47.3
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 4.4e-61 239.2 235 51.5
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 5.7e-61 238.8 273 47.3
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 9.8e-61 238.0 288 46.2
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 1.7e-60 237.3 269 49.1
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 2.2e-60 236.9 277 48.0
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 3.7e-60 236.1 271 48.3
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 3.7e-60 236.1 280 48.2
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 4.9e-60 235.7 275 48.0
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 4.9e-60 235.7 265 47.9
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 8.3e-60 235.0 277 46.9
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.1e-59 234.6 263 49.8
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 1.4e-59 234.2 267 46.4
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 3.2e-59 233.0 266 47.7
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 4.1e-59 232.6 275 47.6
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 4.1e-59 232.6 280 47.1
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 5.4e-59 232.3 269 48.0
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 7.0e-59 231.9 269 47.6
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 1.2e-58 231.1 270 47.4
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 2.0e-58 230.3 272 47.1
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 2.0e-58 230.3 271 48.3
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 2.7e-58 229.9 277 44.0
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 4.5e-58 229.2 275 47.3
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 5.9e-58 228.8 273 47.6
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 5.9e-58 228.8 274 47.1
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 7.8e-58 228.4 271 46.5
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 2.9e-57 226.5 280 46.8
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 2.9e-57 226.5 274 46.4
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 5.0e-57 225.7 245 50.6
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 5.0e-57 225.7 295 43.7
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 5.0e-57 225.7 260 48.1
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 6.6e-57 225.3 271 45.4
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 6.6e-57 225.3 270 46.3
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 8.6e-57 224.9 276 44.9
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 1.1e-56 224.6 275 44.7
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 1.5e-56 224.2 299 43.8
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 2.5e-56 223.4 270 45.9
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 7.3e-56 221.9 278 45.0
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 9.5e-56 221.5 269 46.1
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 9.5e-56 221.5 280 46.1
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 1.6e-55 220.7 270 46.3
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 1.6e-55 220.7 270 45.6
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 2.8e-55 219.9 276 44.2
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 3.6e-55 219.5 274 45.6
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 3.6e-55 219.5 274 44.5
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 6.1e-55 218.8 274 45.6
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 8.0e-55 218.4 299 43.1
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 1.4e-54 217.6 294 42.5
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 3.1e-54 216.5 264 47.0
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 3.1e-54 216.5 271 45.0
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 6.8e-54 215.3 271 45.0
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 8.9e-54 214.9 273 44.7
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 2.6e-53 213.4 341 38.7
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 3.4e-53 213.0 276 42.8
ClCG03G004640 Citrullus lanatus HOM05D004937 ORTHO05D006414 5.8e-53 212.2 196 55.6
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 5.8e-53 212.2 331 39.9
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 9.8e-53 211.5 274 44.5
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 1.7e-52 210.7 273 42.5
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 2.9e-52 209.9 272 44.1
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 2.9e-52 209.9 302 41.4
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 3.7e-52 209.5 271 44.6
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 6.4e-52 208.8 272 41.9
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 8.3e-52 208.4 279 44.1
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 1.4e-51 207.6 273 44.0
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 1.4e-51 207.6 277 42.2
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.4e-51 207.6 260 45.4
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 2.4e-51 206.8 273 42.9
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 5.4e-51 205.7 273 42.5
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 5.4e-51 205.7 273 42.5
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 5.4e-51 205.7 273 42.9
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 5.4e-51 205.7 264 45.8
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 5.4e-51 205.7 200 53.5
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 5.4e-51 205.7 273 42.1
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 9.2e-51 204.9 268 42.9
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 1.2e-50 204.5 295 41.7
CSS0005056 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.7e-50 203.4 173 57.8
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 2.7e-50 203.4 268 42.5
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 3.5e-50 203.0 269 43.9
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 3.5e-50 203.0 276 42.4
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 2.3e-49 200.3 272 41.5
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 1.1e-48 198.0 264 42.4
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 9.5e-48 194.9 269 40.9
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 1.4e-46 191.0 252 41.3
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 1.8e-46 190.7 248 44.4
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 2.0e-45 187.2 280 41.8
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 2.9e-44 183.3 288 39.9
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 7.1e-43 178.7 344 38.4
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.6e-42 177.6 339 38.1
QL05p072848 Quercus lobata HOM05D004937 ORTHO05D006414 3.5e-42 176.4 138 61.6
Zm00001eb048580 Zea mays HOM05D004937 ORTHO05D006414 3.5e-42 176.4 190 45.8
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 7.8e-34 148.7 296 37.2
BcaB08g37427 Brassica carinata HOM05D004937 ORTHO05D006414 1.7e-33 147.5 177 43.5
Dinv13905 Davidia involucrata HOM05D004937 ORTHO05D006414 3.6e-31 139.8 111 60.4
BcaB08g37425 Brassica carinata HOM05D004937 ORTHO05D006414 4.0e-30 136.3 138 48.6
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 3.0e-25 120.2 292 31.5
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 5.1e-25 119.4 171 40.9
Mapoly0074s0008 Marchantia polymorpha HOM05D004937 ORTHO05D006414 5.3e-22 109.4 234 34.2
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis HOM05D004937 ORTHO05D006414 2.6e-21 107.1 124 41.1
Lj2C267G4 Lonicera japonica HOM05D004937 ORTHO05D006414 9.9e-21 105.1 91 53.8
PRCOL_00004553 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 2.4e-19 100.5 290 28.6
Cre06.g305250 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 3.3e-16 90.1 162 34.6
Psat6g178560 Pisum sativum HOM05D004937 ORTHO05D006414 4.2e-11 73.2 90 43.3
PGSC0003DMG400026496 Solanum tuberosum HOM05D004937 ORTHO05D006414 4.3e-08 63.2 70 50.0
Os07g0510800 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 3.7e-07 60.1 55 49.1
Os07g0510300 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 2.4e-06 57.4 89 36.0


User provided reference genes

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