Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0029699 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 8.4e-54 213.4 104 100.0
CSS0040440 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.3e-48 194.1 104 90.4
CSS0049610 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 7.6e-47 190.3 104 89.4
CSS0002638 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 2.7e-28 128.6 104 66.3
CSS0025139 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 4.6e-28 127.9 104 66.3
CSS0036848 Camellia sinensis var. sinensis HOM05D021266 ORTHO05D007254 5.0e-22 107.8 96 54.2
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.3e-19 99.8 98 52.0
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-19 99.4 98 52.0
CSS0014976 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.7e-18 93.6 98 49.0
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-16 89.0 99 45.5
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.5e-15 84.7 89 47.2
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.5e-15 84.7 97 42.3
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.8e-14 81.6 96 42.7
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.9e-13 79.3 98 40.8
CSS0019282 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.2e-13 78.6 83 44.6
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.2e-13 78.2 96 40.6
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.5e-13 77.8 96 40.6
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 9.4e-13 77.0 98 40.8
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 9.4e-13 77.0 96 39.6
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.4e-13 77.0 97 39.2
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.2e-12 76.6 94 44.7
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 4.6e-12 74.7 99 36.4
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.3e-11 72.4 96 37.5
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 3.0e-11 72.0 102 37.3
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 3.9e-11 71.6 91 39.6
CSS0035557 Camellia sinensis var. sinensis HOM05D000036 ORTHO05D000004 5.1e-11 71.2 79 43.0
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 1.1e-10 70.1 94 41.5
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-10 69.7 97 41.2
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 5.7e-10 67.8 96 37.5
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 7.4e-10 67.4 96 36.5
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.4e-10 67.4 83 43.4
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.4e-10 67.4 83 43.4
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.4e-10 67.4 102 36.3
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.3e-09 66.6 82 42.7
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.7e-09 66.2 93 37.6
CSS0022949 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 4.8e-09 64.7 97 39.2
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.8e-09 64.7 92 42.4
vmacro06821 Vaccinium macrocarpon HOM05D001548 ORTHO05D003901 4.8e-09 64.7 97 37.1
CSS0048373 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.3e-08 61.2 106 36.8
Rhsim01G0064200 Rhododendron simsii HOM05D008183 ORTHO05D007254 6.9e-08 60.8 81 39.5
Rhsim03G0007500 Rhododendron simsii HOM05D033359 ORTHO05D340347 9.1e-08 60.5 87 37.9
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-07 60.1 71 38.0
CSS0033631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 3.4e-07 58.5 98 36.7
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 7.7e-07 57.4 76 39.5
Rhsim03G0129900 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.7e-07 57.4 81 34.6
CSS0023048 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.9e-06 55.5 98 34.7


User provided reference genes

Program Settings